Astur gentilis (Northern goshawk): 126050092
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Entry
126050092 CDS
T08649
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04622
RIG-I-like receptor signaling pathway
agen05164
Influenza A
agen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
126050092
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
126050092
05168 Herpes simplex virus 1 infection
126050092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
agen04054
]
126050092
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126050092
Pattern recognition receptors [BR:
agen04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
126050092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Motif
Other DBs
NCBI-GeneID:
126050092
NCBI-ProteinID:
XP_049683506
LinkDB
All DBs
Position
1:35734453..35763735
Genome browser
AA seq
1007 aa
AA seq
DB search
MAAECRDERFLYMISCFRPRLKQVIRVQPVLDRLPSLSAAEREKVRAAALQRGEVEGAEE
LLRAVERGPRGCGWFHEFLQALEHGGCSLAACYVNPSLSQLPSPAEEADHDLCVHLLQLL
HSTLVDKMQTVQVAEKCLQMGIFQDEDLDRIHTVTDNRGNRDGARELLSRIVHKKDWFSP
FLIALRETQHGGLADDLSGNTGGTENRQNGMKNSTNEETEVTSQPGYAVAEDLKQQENVN
ESFSSENSVLEACIGKNSVVSESDVSIGDRSLSNMNENLGQSCTTSDSDEDEMESRASPE
PDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLV
NKVPLVEQHLRKEFNPFLKRWYQVIGLSGDSQLKISFPEVVRRNDVIISTAQILENSLLN
AAKEDEEGVQLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNRKLAKENKPLIPQPQ
ILGLTASPGVGGATSYSKAEEHILKICANLDACRIMTVEEHASQLNNQVKEPYKKTVIAD
DKRRDPFRERITEIMTDIQNYCQLHPKSEFGTQPYEQWVIREERRAAKEEKRKERVCAEH
LKKYNDALQINDTIRMVDAYNHLNNFYKEEKSKKTVRSDDDDDEPAVSKQDETDEFLIAL
FHAKKKQLKELARKPEYENEKLIQLRNTLMEEFTKTEEPRGIIFTKTRLSAFALFQWIKD
NPKFEEVGIKAHYLIGAGHNSEIKPMTQNEQREVIDKFRSGNVNLLIATTVAEEGLDIKE
CNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGAVEREDVNIFREKMMYKAIQR
VQKMPQEEYLNKIQNFQLQSIVEKQMKAKRDQCKTYNKNPSLITFLCKNCHKLVCSGEDI
QVIENMHHVSVKKDFQSLYHTRENKTLQDKHADYQINGEIICKDCGQAWGNMMVHRGLDL
PCLKIRNFVVVFEDKKTTKQMFKKWGELPVRFPNFDYAAHCPSSDED
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagtgccgagacgagcgcttcctctacatgatctcctgcttcaggccgcgg
ctgaagcaggtcatccgcgtgcagccggtgctggaccggcttccctcgctgagcgcggcg
gagagggagaaggtgcgggcggccgccctgcagcggggcgaggtggagggggcggaggag
ctgctgcgggccgtggagcgggggccccgcgggtgcggctggttccacgagttcctgcag
gcgctggagcacggcggttgcagcctggccgcctgctacgtgaaccccagcctcagccag
ctgccctcgccggccgaggaggccgaccacgacctctgcgtgcacttgctgcagctgctc
cacagcacgctggtggataaaatgcagaccgtgcaggtggccgagaagtgcttgcagatg
ggcatcttccaggacgaggacctggatcggatccacactgttactgacaatcgtgggaac
agagatggtgcaagggagctactgagcagaatagtgcataagaaagattggttctctcct
tttttgattgctctgcgtgaaacccaacatggaggccttgcagatgatttaagcggaaat
acaggaggaacagagaatagacaaaatgggatgaagaacagtacaaatgaagaaacagaa
gttacaagccaaccaggatatgctgtagcggaggatttgaaacagcaagaaaatgtgaat
gaaagtttcagcagtgagaacagtgtattggaagcatgtattggaaagaattctgtagtt
tcagagtcagatgtctccataggagatagaagtctcagtaacatgaatgaaaacctagga
cagagctgcacaaccagtgattcagatgaagatgaaatggagagcagagcttcacctgag
ccagatctgatcctgagagattaccagatggaagttgcaaagccagcactgaatggggag
aatattataatatgtctccctacaggcagtggtaaaacaagagtggctgtttacattacc
aaagatcatttggataagaagaaaagagcatcagagcccggaaaagttatagtacttgtt
aataaggtaccattggtagagcagcatttacgaaaggagtttaatccattcctgaagcgt
tggtatcaggttattggtttaagtggcgattctcagctaaaaatctcatttcctgaagtt
gtcagaagaaatgatgttatcatcagtacagcgcagatccttgagaattcattgttaaat
gcagccaaagaagatgaagaaggtgtccagttatcagatttttcactcatcattatcgat
gagtgtcatcacactcaaaaggaaggtgtctacaacaatataatgcgacgttacttaaaa
gaaaagatgaagaacagaaagctggcaaaagaaaacaaaccactgatcccacagcctcag
attctgggacttacagcctcacctggtgtaggaggtgcaacatcctactcaaaagctgaa
gaacatattctgaaaatctgtgccaatcttgatgcatgtagaatcatgactgttgaagag
catgcctcccaactgaacaatcaggtgaaggaaccatataagaagactgtgattgcagat
gacaaaagaagggatccatttagagagagaattactgagatcatgacagacattcaaaac
tattgccagctccatccaaaatctgagtttggaactcagccatatgaacagtgggtgatt
agagaagagagaagagctgcaaaagaagaaaaacgcaaggaacgtgtgtgtgcagaacac
ttgaagaaatacaatgatgctctccagataaatgacaccatccgaatggtggatgcgtac
aatcacctaaataacttttataaggaggagaaaagtaagaagacagtaaggagtgatgat
gatgatgatgaaccagcagtatcaaaacaggatgaaacagatgaatttctaatagcttta
tttcatgcaaaaaagaaacagctgaaagagttggctagaaagccagaatatgaaaatgag
aagctaatacagttgcgaaacactttaatggaggagttcacgaagactgaagaacctaga
ggaattattttcacaaagactcggctaagtgcctttgctttattccagtggattaaggat
aacccaaaatttgaagaagtgggaattaaggcccattatcttattggtgctggacataac
agtgaaattaaacccatgactcagaatgagcaaagggaagttattgataaattccgaagt
ggaaatgtaaatttacttattgctacaactgtagctgaggaaggcctagacatcaaagaa
tgtaacatcgttattcgctatggcctcgtcaccaatgaaattgctatggtgcaggctcgt
ggtcgagctcgagctgatgagagcacctatgcacttgtggcttcgagtggctcaggagct
gttgaacgcgaagatgttaatattttccgtgagaaaatgatgtataaggccattcagcgt
gtccaaaagatgccgcaggaagagtatttaaataagattcagaatttccagttgcaaagt
atagtggaaaaacaaatgaaggcaaagagagatcagtgcaagacatacaacaaaaatcct
tcactaataacattcctatgcaaaaattgccacaagctggtatgttctggagaagacata
caggttattgaaaacatgcatcatgtcagtgtgaagaaagatttccaaagtctttaccat
acaagagaaaataagacactgcaagataagcatgccgattaccagataaatggggaaatt
atatgtaaagattgtggacaagcttggggaaatatgatggttcaccgaggtcttgacctg
ccttgtctaaagattagaaattttgtggttgtgtttgaagacaagaaaacaacaaagcaa
atgtttaagaaatggggagaactgcctgtcaggttccctaattttgattatgcagctcat
tgtccttcaagtgatgaagattaa
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