Astur gentilis (Northern goshawk): 126050219
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Entry
126050219 CDS
T08649
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04382
Cornified envelope formation
agen04510
Focal adhesion
agen04512
ECM-receptor interaction
agen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126050219
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126050219
09142 Cell motility
04820 Cytoskeleton in muscle cells
126050219
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126050219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agen04147
]
126050219
00536 Glycosaminoglycan binding proteins [BR:
agen00536
]
126050219
Exosome [BR:
agen04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126050219
Glycosaminoglycan binding proteins [BR:
agen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126050219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126050219
NCBI-ProteinID:
XP_049683767
LinkDB
All DBs
Position
24:complement(5006155..5093798)
Genome browser
AA seq
1689 aa
AA seq
DB search
MEPRWRSRSLAAGCLVLLLLGCWGPEEAVAAACHGCTSLSKCDCSGVKGEKGERGFPGLE
GQPGLPGFPGPEGPPGPRGLKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQDGPP
GPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEVGEIITSLLPGEKGDPGFP
GLPGIPGPPGSMGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
PPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGVKGEKGEQGEPGK
RGKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDIGPPGPPGIVISRPGIDATVG
PKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGLPGV
SIPGQPGLDGPRGPPGPPGPPGPPAPSVPPGEGLCEQGPPGPPGIPGQQGFMGERGQKGD
QGDTCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGSPG
APGRPGPKGDPGDVLTSPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSV
AFKGEMGIPGDPGIPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPG
QTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGQPGPPGPKG
FPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGTKGVQGPKGD
PGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPP
GLQGIPGEKGDPGPPGFDVPGPPGDRGAPGYPGPPGLPGPQGSPGPPGRDGIPGFPGAKG
EMGVMGAPGPPGPPGTPGRNGLPGLKGNNGLPGPPGPPGPVGQKGIKGEAGLPGPPGKVD
PKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGVPGLPGTKGDMGLPGQ
PGPTGPPGLKGAMGEMGLPGPPGIKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSIGIP
GLPGPKGDPGLPGYPGSPGSKGIAGNPGLPGFPGSPGAKGEPGLPGFPGTPGIPGPKGIE
GPPGNPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGPPG
LPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGSPGP
PGVPGRPGPPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGRQGDPGRPGL
NGMKGDPGLPGVPGFPGMKGPTGPPGPAGLTGSQGLPGPPGPPGLPGTTGRSIVVKGDPG
PPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERGLPGQPGSRG
IQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGFSLLYVQGNE
RAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLTGQS
IQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGAEGSGQALAS
PGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLKAGDLRTRIS
RCQVCMKKT
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcggtggaggagccgcagcctggctgccggctgcctggtgctgctgctgctg
gggtgctgggggccggaggaggcggtggcggcggcttgccatggatgcacatctttatcc
aaatgtgactgcagtggagtaaaaggtgaaaagggtgaaaggggattcccaggcttggaa
ggacagccaggtttgcccggatttccaggaccagaaggaccacctggtccaagaggcttg
aagggtgatgatggacttccagggcctattggacccaaaggaatcagaggaccgccagga
cttccaggatttccaggaacaccaggacttcctggattaccaggacaagatgggccacca
ggacctcagggtatcccgggatgcaatggaacaaagggagagcgtggattcccaggcagt
ccaggttttcctggtttacaagggcctcctggaccccctggtctgccaggtatgaagggt
gaagtaggtgaaataattacatccttgctgccaggagagaagggtgacccaggatttcca
ggtcttccagggatacctggcccacctggctccatgggaataccaggtccagttggccct
ccagggcccccaggtttgacgggacctcctggtccaccagggctgccaggacctaagggt
aatatgggtttgaatttccaaggacccaaaggtgaaaaaggtgaacaaggtcttcaggga
cctccagggccaccaggacaaattggagaacagaagagaccaaatgacattgagtttcag
aaaggagatcagggtattccaggtgatccaggcccaccaggacttcctgggccacaaggc
cctcctggtcttcccggtggcgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaa
agaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggtttacctggt
gggcctggaataaatggtgctccaggaagagatggtgaaaagggtgaaaaaggtgacatt
ggtccccctggtcctcctggaattgtcatttcaagaccaggcattgatgcaacagtggga
ccaaaaggtagcaaaggattgccaggacttccaggagccaaaggggagcgtggattctct
ggtaggccgggcccgcctggcttgccaggttctccaggcatcactactgttggaccacct
ggcccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggtgtt
tctattcctgggcaaccaggacttgatggaccacgaggacctccaggaccaccaggtccc
ccagggccacctgcaccatctgttcctcctggtgaagggttatgtgagcaggggccacca
ggtcctcccggaattccaggacaacaaggctttatgggggagcgaggccaaaaaggtgat
caaggagacacatgcttcaattgcataggaactggagtaactgggcctcctggggagaga
ggaccaccaggacctccaggtagtccaggttctcctggttttcctggaccaaaaggtgaa
aaggggcttcctggattaactggccttgtagggccaccaggatttccagggtccccaggt
gctcctgggagacctggtcctaaaggagacccaggggatgtcctgacttcaccaagaatg
aaaggtgacaaaggagaccctggcttcccaggacctccgggtcttcctggcatagatggc
actcctggacgagatggactgccaggtctacctgggcctaaaggggaacctggcagtgtt
gcattcaaaggagagatgggtattccaggtgatccaggaataccaggtcttcctggagac
aaaggacttcctggacctcctggttttggtccacaaggttcacctggtgaaaaaggcatc
caaggtgtatcaggccgtccagggcctcctggagttcctggtccaaaaggtgaccctggc
cagactattacagagccaggagttcctggcccccctggtcctccaggaagaaatggtgac
ccaggtcttccaggagatcctggtcagccaggtcagcgcggcttaccaggcatcccaggt
gcaaagggagagccaggtattcctggcattggacaaccaggcccaccaggcccaaaaggt
ttcccagggactccaggccctcccggagctccaggaactccaggtcgccctggtctagac
ggacctcctggaccacctggtttcccaggacagaagggggatcgtggatttggagttcca
ggaccgcccggaccccccggaccaccaggcacaaaaggagttcaaggacctaagggtgac
cctggcttcccaggaaaccctggtctcccaggacgggcaggttttgatggaactccaggg
cccaaaggtgaccctggaccaagtggaccaccaggactcccaggcccaccaggcatcccc
ggcattggtggtcaaggtccacctggatctccaggacctccgggtcctgttggcccccca
gggttgcaaggcattccaggggagaaaggggatccaggtcctccaggcttcgacgttcct
ggtcctccaggtgaccgtggagccccaggatatccaggaccccctggtctcccagggcct
cagggttcacctggaccacctggccgggatggaatacctggatttccaggtgccaaaggt
gagatgggcgtcatgggagctcctggtcctccagggcctccaggaactcctggaagaaat
ggcctgcctggtttgaaaggtaataatggattgcctggcccaccagggcctcctggacca
gtaggacagaagggcatcaaaggtgaagcaggcctgccaggtccacctggaaaagttgat
ccgaaacagctaggagcaaaaggagaaaaaggcgagccaggtgttccaggtattcctggt
ttatcaggacagaaaggttatcaaggtcttccaggtgacccaggcccaccaggacttagt
ggcccaccaggtgtgccaggattgccaggcaccaagggagacatggggcttcctgggcag
ccaggaccaacaggacctccagggttaaaaggtgccatgggagagatgggccttccaggt
cccccagggattaaaggcagccaaggaatagcaggacgtccagggcagcctgggcctgca
ggatttcctggactgaaaggggagaaaggtgaccctggtctttcaagcattggtattcct
ggtctccctggaccaaagggtgatcccggtttgcctggatacccaggtagtccaggcagt
aaaggtatagctggaaatcctggtttgcctggatttccaggcagtccaggtgcaaaagga
gaaccaggccttcctggattcccaggaacgccaggaattccaggaccaaaaggtattgag
gggcctccaggtaatcctggactgcctggaccacctgggccagtaggtgatatcggtcgt
cctggccctcctggtccttctggggagaagggacagcctggtcgagacggtatccctgga
ccagctggacagaagggcgaaccaggtctaccaggttttgggcgcccaggacctccagga
cttcctggattgtcagggcaaaaaggagaactggggttacctggccctccagggccccct
ggacttccaggtctgaagggagaaccaggtttccagggattccctggtctacagggtcca
ccaggtccaccaggattaccaggtccacctctggaaggtcctaaaggtagccctggtcca
ccaggtgttccaggaaggccaggtccaccaggcccagaaggtccgcgagggccaccaggc
agtggaggacttaaaggggaaaaagggaaccctggtcaacctggcccacctggcctgact
ggtcaaaagggagatcaaggaccacctggacgccagggggatcctggtcgtccaggtctg
aatggaatgaagggcgaccccgggcttccaggcgttccaggattcccaggtatgaagggt
cccactggacctccaggacccgctggcctcacgggcagtcaaggactgccaggcccacca
ggtccaccaggtttaccaggtaccactggacgaagcattgttgtcaaaggtgaccctggt
cccccgggtcctccaggacagcctgggtcgaaagggccacctggattgccagggccacag
ggattgccaggtccaattggtcttcctggtgacccagggcgagatggactacctggtttt
gatggtccagcaggacgtaaaggggagagaggtcttccaggccaaccaggttcacgagga
atacagggacctcctggtcctgatggcttacaaggcccacctggtcctcctggaacagct
tctgttgctcacggattccttataactcggcacagccaaaccagggatacaccactatgt
ccacaaggaacatcaagaatatatgatggattctctcttctatatgtgcaaggaaatgag
agagcacatggccaggatttgggtactgctgggagctgtcttcgacgtttcagcaccatg
cccttcatgttctgcaacatcaacaacgtttgtaattttgcatcaaggaatgactattcc
tactggctatcaactccagagccaatgccaatgagcatggagccgctgactgggcaaagc
atccagccattcattagccgatgtgttgtgtgtgaagctcctgctatggtgatagctgtc
cacagtcagaccattcagattccatcgtgtcctccaggctgggactccctttggatcggt
tactctttcatgatgcacactagtgctggagcagagggctctggacaggccttggcatca
ccgggatcctgtttagaagaattccgctcagctccgtttattgaatgccatggtcgtggc
acttgtaattactatgccaattcatatagtttctggctggcaactgtagaggtgtcagaa
atgttcagtaaacctcagtcagagacactgaaagctggagacttgaggacgcgtattagt
cgttgtcaagtttgcatgaagaagacgtaa
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