Astur gentilis (Northern goshawk): 126050309
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Entry
126050309 CDS
T08649
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
126050309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agen01009
]
126050309
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
agen04515
]
126050309
Protein phosphatases and associated proteins [BR:
agen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126050309
Cell adhesion molecules [BR:
agen04515
]
Cadherins
Protocadherins
126050309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
DUF6249
Big_9
Motif
Other DBs
NCBI-GeneID:
126050309
NCBI-ProteinID:
XP_049684004
LinkDB
All DBs
Position
24:complement(19488386..20000240)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLIRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFAVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKETALEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGQHTLGRPLPKDDTDKGQGGPRP
QFYNTCERHCASEDPVKVIPLASFAAPHQAPAPGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggcgcacaggagaagaattataccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctaacgctggacccagatgtgcccctttcgtcacca
ctacagttcaagcttgtgtataagaccggggatgtaccattaatacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagagaagctgtgctctggcatc
ttcagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgcccccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccatctgccatcgatccggacattggggtgaatggtattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacgtttggatccattacaaatgatcagggtcaaaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggatagggagcagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagccctccaagatctagcaccgccatcctgcaagtcacagtgactgatgtgaatgat
aatcgcccagtcttcaaagagaatgacattgaagttagtgttccagaaaacgctccagtg
ggcacctctgtttctcagctccatgccactgatgcagatctgggctcaaatgcacaaatc
cacttctatttcagcaatcaaatctccagtttggccaagaggctctttgccattgataac
accactggcctcatcactataagagaaccactagacagggaggaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacgagatacataatcaatccagtg
aacggaacagtgcttttatccgagaaggctccccttaatacaaaaattgcactgataaca
gtaatggacaaggatgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttctcctcgagacagccacatttcta
gattatgaagccacacgggagtatgccataaaaatagtggcttcagattcagggaaacct
cccttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaatgacaatgcccca
gtttttacacagcctatcataggtctttccatccctgaaaacaatgctcctggtactcag
ctaaccaagataagtgctacagatgctgacagtggacgcaatgctgagatcagctatatc
ctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggcattctgacagca
gtgagaaagctggacagagaaaagcaagacaggtactccttcgctgtgctggctaaagat
aacggcatgccgcccttgcagaccaatgctactgtgacagtgtcagtcttggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccggaaaacttaccc
atgtatggcacagtggggcttatcacagttacagatgctgactcgggagagaatgctgcg
gtcactctctctatattaaatggtagagataatttcattatagatccacttactggtgta
ataagacctaatattacctttgatagggaacagcaggggtcgtatacgttccaggtgaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgacaacaggcctgtttttgttattccttcatctaattattcgtacgagttg
gttccaacatcagccagtccagggtctgtagttactaaagtctttgcagttgataatgat
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttgttt
acaattgaccaattaacaggcaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccagagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacagtcaccaacagttcctacgtacaagag
ctagtgcgcaggaatatggaaactccagttggccagaacgttggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtaatttttgttactgctttagtacggtgccgccagacgcctaggcacaaggtt
gtccaaaaaaacaagcagagtggtgaatgggtttccccaaaccaagagaataggcagatc
aagaagaagaagaagaagaagaagcgctcccccaaaagtctcctcctcaactttgtgact
attgaagaatctaagcctgatgatcctggtcacgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatacaactgggccaccacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaaatctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctggataacacctttgtggtgggctgtgactcactttccaagtgctcgtcaagcagc
tcggacccttacagcgtttctgaatgcagctgtcaagggggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaaatgggaaggccacaaactcctttgaaagaaaca
gccttggagccttggactcagccacagcctcagcgccgtgtcacgtttcacctaccagat
ggctcccaggaaagctgcagtgacagcgggctcggagaccacgaacccacgagcggtgct
agcacgtcgcaccctctgcccctcggcttcccccaggaggagtactatgagcaagcttca
cccaacagccggacagaaggagacggcaactcggacccggagtccactatcgaagtcaat
ctccagaaagccctggccgaagcctctgaaacctgcacgcaggagtgtctcatcctaggc
cattctgacaactgctggatgcccccttctttgacacagtatcagcagtccaacacccct
ttgccgtcgttcggcttccagcaaggctggggccgaggagccaggcctgagggacaacac
actcttgggaggccccttccaaaggacgacactgacaaaggccagggtgggcccaggccc
cagttctacaacacctgtgaaagacattgcgccagcgaagatcccgtcaaagtcattcct
ctggcaagcttcgccgcgccccaccaggcaccggcgccggggagtagcactacgtttata
cacgagcaccagctataa
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