Astur gentilis (Northern goshawk): 126050631
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Entry
126050631 CDS
T08649
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agen03036
]
126050631
Chromosome and associated proteins [BR:
agen03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126050631
microRNA pathway
RISC loading complex
126050631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
Amidoligase_2
Motif
Other DBs
NCBI-GeneID:
126050631
NCBI-ProteinID:
XP_049684718
LinkDB
All DBs
Position
25:complement(6866875..6937151)
Genome browser
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLKELDEALTFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTNETE
TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPNSSLVENENYCKHSTIVVPENAAHQGANR
TSSAENHDQMSVSYRTLLNESPSKLQIDVSAELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSYPIQNLYNSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKMA
VTTITSKAINLSKDRADSEKNPSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDETTKENLLANGKLDDYDDDEEDEDLMWRLPKEEADFEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSLGNVQFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWKGTLCATRENSNSEQKSLSPNS
VSATVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcaggactgcagctcatgacccctgct
tcctccccaatgggtccattttttggactaccatggcaacaagaagcaattcatgataac
atttacacaccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgcttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatttcaacaaaaatggaaaaagaactgtgttcttggtc
aactcagcaaatcaagttgctcaacaagtgtcagctgtcaggacacattcagatcttaaa
gtgggagagtattcaagtttagagataactgaatcgtggacaaaagagaagtggagtcag
gaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgaga
aatgagtatttatccctgtcaaatattaatcttctggtgtttgatgagtgccatcttgca
atccaggatcacccataccgtgaaattatgaagatctgtgaggattatccatcatgtcct
cgaatcttgggattaacagcttccattttaaatgggaaatgtgatcctgctgagttagag
gagaagatccagaaactggagaaaattttaaagagcaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgttgtagactgtggaccatat
actgacaaaagtgggttgtatggaagattattaaaggaattggatgaagcgcttactttt
ctaaatgactgcaacatatctgtacattcaaaagaaagagattccaccttaatttctaag
cagatactgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataag
gtagctgggatgatggtgagagagctacagaagtatatcaaacatgaacaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcgcctgcctcacttgatctgaaatttgtaaccccaaaagtaataaagctg
cttgaaatcttgcgcaaatataaaccatatgaacggcagcagtttgaaagtgttgaatgg
tataacaataggaatcaggataactacgtatcttggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccggagactaatttcccatctccctttactaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttg
ataaaagaagctggcaagcaagatccagaactggcttacatcagtagcaattttataact
ggacatggcattggcaagaaccagcctcgtaacaagcagatggaagtagaattcagaaaa
caggaagaggttcttagaaaatttcgagcacatgagacgaacttacttattgctactagt
attgtagaagagggtgttgatataccaaaatgcaacttggtggtgcgttttgatttgccc
acagaataccgttcctacgtgcagtcaaaaggaagagctagagcaccaatttccaattac
attatgttagcagatacagacaaaatcaaaagttttgaagaagatcttaagacatacaaa
gcaattgagaagatcctcagaaacaagtgctcaaaatctgttgataccaatgaaactgaa
actgaacccattgttgatgatgacgatgtatttccaccctatgtgttgaggccagatgag
aacagtccaagagttactattaatactgctattggacacataaataggtactgcgctaga
ttaccgagtgatccatttacacacctagctcccaagtgtaaaacccgagaactacctgat
catacgttttactctactctctacctgccaatcaactcgcctcttcgagcttcaattgtt
ggtcctccaatgagttgtgcaagactggctgagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttgatgccagttggtaaagaaacggtt
aaatatgaggaggagcttgatttacatgatgaagaagaaaccagtgttccaggaaggcca
ggctctacaaaacgaagacagtgctatcctaaagctattccagaatgtttgagggatagt
tatcccaaacctgatcagccctgttacctgtatgtaataggaatggtgttaacgactcct
ctacctgatgagctcaacttcaggagacgaaagctatatcctcctgaggatacgacgaga
tgttttggcatattgacagccaaacctatacctcagattcctcactttcctgtgtatact
cgctctggagaggttacaatatctattgagcttaagaaatctggttttactctgtctctg
caaatgcttgagctgataacacgactccaccagtacattttttcacatattcttcgtctt
gagaaacctgcactagagttcaaacccacagaagctgattcagcctattgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagtttatggaagacatt
gagaaatctgaggcgcgtacaggcattcctagtacacaatatacaaaagaaatgcctttt
attttcaagttagaagattaccaggatgcagttatcattccacggtatcgaaattttgat
cagcctcatcgattctatgtagctgatgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaaccaagtataatcttgacctt
accaatctcaaccagccactgttggatgtggaccacacatcttcaagacttaatcttttg
actcctcgacatttgaatcagaaggggaaagcacttccactaagcagtgctgagaagagg
aaagcaaagtgggaaagtttgcagaataagcagatactggttccagagctctgtgctata
catcctattccagcatcattgtggagaaaagcagtttgccttcccagcatactttatcgc
ctgcactgccttttgacagcagaggaactaagagctcaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagatttcagatatcctaacttggacttcggatggaaaaag
tctattgacagcaaatccttcatctctattcctaactcctctttagtagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctcttctgcagaaaaccatgaccaaatgtctgtgagttacagaacattactcaatgag
tcacccagtaaactccaaattgatgtctcggcagaacttgcagcaattaatggtgtttct
tataataaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaacagtgagaaccagcccaagcccagcaatgaatgtactctactgagt
aataaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaatggca
gtgaccaccattacttcaaaagctattaatctttcaaaagacagagcagattctgaaaag
aacccttccagtgggtactcctcaaaaactctcggtcctaatcctggtctcattcttcaa
gctttgactctttcaaatgctagtgatggatttaatctggagcggctagaaatgcttggt
gattcatttttaaagcatgccatcactacatacttgttttgcacttaccctgatgctcat
gagggacggctgtcatatatgagaagcaaaaaagtcagcaactgcaacttgtatcgcctt
ggaaaaaagaaaggactgcctagtcgcatggtggtgtcgatttttgatcccccagtcaat
tggcttcctcctggttacatagtaaaccaggacaagagcaacactgataagtgggagaaa
gatgaaacgacaaaggagaacttgttggctaatggtaaacttgatgattatgatgatgat
gaagaggatgaagacctaatgtggaggttacccaaggaagaagcagactttgaagatgat
tttctggagtatgatcaggagcatatcaaattcattgataatatgctaatgggatcaggg
gcttttgtgaagaaaatttctctctcacacttttcaaccactgattcaaactatgaatgg
aaagcacccaaaaagtcatccctgggtaatgttcagttttcatcagattttgatgatttt
gactatagctcttgggatgctatgtgctacctggatcctagcaaggctgttgaagaggat
gattttgtagtgggcttctggaatccatcagaagaaaactgtggtgttgatgcaggaaaa
cagtctatctcatatgacttgcatacagaacagtgtattgctgacaaaagcattgccgac
tgtgtggaagccctgttgggctgctatctgaccagctgtggtgaaagagctgctcagctt
ttcctgtgttcattggggctgaaggtgctccctgtaattaagaagactgattggaaaggc
actttgtgtgctaccagagagaatagtaacagtgagcagaaaagtctttcaccaaactct
gtttctgctactgtagctaattcagagccttctctgtataaagacctggagtatggctgt
ttgaagattccaccgaggtgtatgtttgatcacccagatgctgaaaaaaccctaaatcac
cttatttctggttttgaaaactttgagaagaaaataaactacagttttaagaacaaggct
tatcttcttcaggcatttactcatgcctcgtaccattataataccattactgattgttac
cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcaacactctccaggagttcttactgacctacgatctgctttagtcaat
aataccatttttgcatcattagctgtaaagtatgactaccacaagtacttcaaagctgtc
tctcctgaactgtttcatgttattgatgattttgtgcagtttcaaatggaaaagaatgaa
atgcaaggaatggattctgagctcagaagatctgaagaagatgaagaaaaagaggaagac
attgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgccatttatatg
gatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccatta
atagaaaaattttctgctaatgtgccccgttccccagtgcgagagctgctggagatggag
ccagagacagccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaaca
gtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacaggattgccaaa
tctgcagctgcgagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaac
agctga
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