Astur gentilis (Northern goshawk): 126050720
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Entry
126050720 CDS
T08649
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen04137
Mitophagy - animal
agen04140
Autophagy - animal
agen04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126050720
04137 Mitophagy - animal
126050720
04148 Efferocytosis
126050720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agen03000
]
126050720
Transcription factors [BR:
agen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
126050720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
126050720
NCBI-ProteinID:
XP_049684949
LinkDB
All DBs
Position
25:complement(16194150..16229025)
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AA seq
811 aa
AA seq
DB search
MESPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPST
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQT
QTPSSSADEIKPATERVDDVKTLIVPSSPVHIINETSSAPPSPYGGNRSRTASPIRAGKG
TLDQTEKSCPGSPSLLTVTLNKRSTAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG
SLFQQTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL
TSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggagagccccggcggcgtcaccgacaagaagaggattagctcagaacgcagaaaagag
aagtcaagagatgcagcccggtgccgaaggagcaaggaatcggaagtattctacgagctt
gcccatcagctgcctctgccccacaccgtgagcgcacacctggacaaggcatccattatg
agactgaccatcagctacttgcgcatgagaaagctgctagatgctggtgagctggagaca
gaggccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggatttgtc
atggttctatctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagcgtatttgatttcactcatccatgtgac
catgaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
caaaatacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacatggaaggtactccactgcactggacacattcgtgta
tacgacacatgtggtaatcaaactcactgtggctacaaaaagcctcccatgacgtgtctg
gtgttgatctgtgaacctattcctcatccatcaaacattgaggtccccttggacagtaaa
acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca
gagttgatggggtatgagccagaggaactcttgggtcgctcaatctacgagtactatcat
gcgttggattctgatcatctcaccaaaacacaccatgacatgttcacgaaagggcaggtg
acaacaggacagtacagaatgcttgctaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtaaactat
gtgttgagtggaattgttcagaaggacttgattttttcccttggacaaactgagtgtatg
ctgaaaccagtggagtctcctgatatgaaaatgaccaaaatattcagcaaagatgacctg
gatgataccaatagcttatttgaaaaacttaaacaggaaccagatgctttaactgtgctg
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaaaccactt
cgtagtaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaagcaca
gagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgat
gtggataatgatatggctaatgaattcaaactggaattagtggagaaactctttgctata
gatacagaagcaaaaaatccattctctactcaggaaactgatttagatttggagatgttg
gctccttacatcccaatggatgatgacttccagctgcgatcctttgatcagctatctcca
ctggaaagtagttcttctggctctcaaaatgcagccaccattaccatatttcagcagact
cagacaccatcaagtagtgctgatgaaataaaaccagcgacagaacgtgtggatgacgtg
aagacgctaattgttccttcgtctcctgtccacataatcaatgaaacgagtagtgcccca
ccgtccccctacggtggaaacaggagtcgaactgcatctccaatcagagcaggaaaagga
acattggatcagacagaaaaatcttgtccaggatcgcccagtttgctaacagtcactctg
aataaaagatctactgcaatggatgaagaactaaatccaaagatgctagctttgcataat
gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggt
tctttattccagcagacaggtgaccgtggaggaaatgcatcacttgcttggaaacgtgta
aaaggatgcaaaacaaatggtcacaatggcgtggagcaaaagacaatcattctactatca
actgacatagcaagtaaacttctagggcagtcgatggatgaaagtggactaccccaactc
acgagttacgattgcgaagtaaatgctcccatacaaggcaacagaaacctgctacagggt
gaagaactgctcagagctctggatcaagttaactga
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