Astur gentilis (Northern goshawk): 126051002
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Entry
126051002 CDS
T08649
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03440
Homologous recombination
agen03450
Non-homologous end-joining
agen04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126051002
03450 Non-homologous end-joining
126051002
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
126051002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agen03032
]
126051002
03400 DNA repair and recombination proteins [BR:
agen03400
]
126051002
DNA replication proteins [BR:
agen03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
126051002
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
126051002
BRCA1-C complex
126051002
NHEJ (non-homologous end-joining)
MRX complex
126051002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
AAA_15
SbcC_Walker_B
DUF2703
AAA_29
AAA_24
Motif
Other DBs
NCBI-GeneID:
126051002
NCBI-ProteinID:
XP_049685568
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All DBs
Position
26:21281518..21305199
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFHPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKEN
VKSIESQLDPLKSSLAAVEQNLMKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVREKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKERQERDTEAANRLMREFAQ
KEAMKQKQIDEIRDKKTGLERTIDLKLDIQNKKQAELKNVKCELQQLEGFSDRILELDQE
IVKTEHELEKAEKNSNVETLEVEVRTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELKSLLGYFPNKNQLEDWLHVQNRKINQTRDNLADLNKR
LASVEYHKTYVGNELKKKEEQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRSKIQNANRDLTGLKSEIEEQQSFLQKALS
QEDGAKACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQHRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLNATLEKLQQEKEELMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKDDYKKQKECELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIRQLVKEMGEMKVPQIKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALMEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNVDQCSEIMKCSVSSLGSYIH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattgagaagatgagtatcctcggagtgaggagctttggggtagaggataaa
gacaaacaaattatcactttctttcatccattaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccactggagattttcctcctggc
accaaagggaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgtgatgtaaacggtgagctcgtagctgtccagcgatccatg
gtgtgtacccagaaaggcaagaaaacagaatttaaaacacttgaatctgtcattactaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatagagagatg
atcagcgcccttggtgtttccaaatcagtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaaaagagtgccagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccagaatcatcttagcaacagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagagttctctggcagcagttgaacag
aatctcatgaaagtaatgaggctggacaacgatgtaaaagccttggagagcaggaggagg
cagatggagaaggataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaacggtgagggagaaagagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaatgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacgttaccagttttcacaggttgttg
aaggagagacaagaaagagatacagaagctgcaaatcgtttgatgagagaatttgcacaa
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaattagatattcaaaataagaaacaagctgagctgaagaatgta
aaatgtgaattgcagcagttggagggtttttcagacagaattctggagttggatcaggag
attgtcaagacagaacatgagctggagaaggctgagaagaacagcaatgtagaaacactt
gaagtagaagtacgaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggaacagttgaatctacatactatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagatcagaaaagtaaaatcaaggcattct
gatgaactgaagtcactgttgggatactttccaaataaaaaccaacttgaagactggctt
catgttcaaaatagaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcagtagaatatcataaaacttatgtcggtaatgagctaaaaaaaaaagaagag
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagtcaagattttgacagt
gacctgaacaagcttcaggatgaaattgaaaagagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagtttattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtcatcagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactccaagatagggacataccagacttgaggagcaagatacagaatgcaaacagggat
ttaacaggcctgaagagtgagatagaagaacagcaatcattcttgcagaaagctttgtct
caggaggatggtgccaaggcatgtttacaggatataacactaatggagaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccatgaaaaacaagagaaaaagcacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcagaatcagatt
cagcagctaaagagtgcagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcatcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttgaatgcaactttagaa
aaactgcagcaggagaaggaagaactaatgaacaaaaggactgcaagtaataaagaaacc
caagagaagataaatggcataaaagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagacgactataaaaagcaaaaggagtgtgaactt
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaggag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataagacaa
cttgtgaaggagatgggagaaatgaaagtcccacaaataaagaatgaacagaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggtcgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaagtacagggagatgatgattgttatgagaacaacagagctagtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcagatgagaatgtctcggcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcattttggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgcccttatggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacattctacaggataaagaagaacgttgaccagtgctctgagatcatg
aaatgcagcgtcagttccctaggctcatacattcattag
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integrated database retrieval system