KEGG   Astur gentilis (Northern goshawk): 126051002
Entry
126051002         CDS       T08649                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
agen  Astur gentilis (Northern goshawk)
Pathway
agen03440  Homologous recombination
agen03450  Non-homologous end-joining
agen04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:agen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    126051002
   03450 Non-homologous end-joining
    126051002
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    126051002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agen03032]
    126051002
   03400 DNA repair and recombination proteins [BR:agen03400]
    126051002
DNA replication proteins [BR:agen03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    126051002
DNA repair and recombination proteins [BR:agen03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     126051002
    BRCA1-C complex
     126051002
   NHEJ (non-homologous end-joining)
    MRX complex
     126051002
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SMC_N AAA_15 SbcC_Walker_B DUF2703 AAA_29 AAA_24
Other DBs
NCBI-GeneID: 126051002
NCBI-ProteinID: XP_049685568
LinkDB
Position
26:21281518..21305199
AA seq 1312 aa
MSKIEKMSILGVRSFGVEDKDKQIITFFHPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQNHLSNREAQLAASKEN
VKSIESQLDPLKSSLAAVEQNLMKVMRLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYQNHQRTVREKEKRLSDCKRELDRATKECQRFNSEKSELLIERGRLQLQADRH
QEHITMRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKERQERDTEAANRLMREFAQ
KEAMKQKQIDEIRDKKTGLERTIDLKLDIQNKKQAELKNVKCELQQLEGFSDRILELDQE
IVKTEHELEKAEKNSNVETLEVEVRTLQNEKINLDKALRKLDQEMEQLNLHTMTITQMEM
LKKDKADKEEQIRKVKSRHSDELKSLLGYFPNKNQLEDWLHVQNRKINQTRDNLADLNKR
LASVEYHKTYVGNELKKKEEQLSLHEAKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RKEKKRDEMMSLKPLRRTVVELQDRDIPDLRSKIQNANRDLTGLKSEIEEQQSFLQKALS
QEDGAKACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD
TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQHRRQLEEQTVELTTEVQS
LCREIKEAKEQVFPLNATLEKLQQEKEELMNKRTASNKETQEKINGIKEKVKDINKYVKE
IENYIQQGKDDYKKQKECELDEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNIRQLVKEMGEMKVPQIKNEQKHLEEKIESLKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALMEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVETFYRIKKNVDQCSEIMKCSVSSLGSYIH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcgaagattgagaagatgagtatcctcggagtgaggagctttggggtagaggataaa
gacaaacaaattatcactttctttcatccattaactattttggtgggaccaaatggtgca
ggaaaaacgactatcattgaatgtcttaaatacatatccactggagattttcctcctggc
accaaagggaactcatttgttcatgatccaaaggttgccaatgaaacagatgttagagct
cagattcgattacagtttcgtgatgtaaacggtgagctcgtagctgtccagcgatccatg
gtgtgtacccagaaaggcaagaaaacagaatttaaaacacttgaatctgtcattactaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatagagagatg
atcagcgcccttggtgtttccaaatcagtgattaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggtacgactgaaacaaagc
ttgaaagtaaaagagtgccagacagaactgaaatacctaaaacagaataaagaaaaagca
caggaaatccagaatcatcttagcaacagagaggctcaactggctgcttctaaggagaat
gtaaaatctattgagagtcaacttgatcctctaaagagttctctggcagcagttgaacag
aatctcatgaaagtaatgaggctggacaacgatgtaaaagccttggagagcaggaggagg
cagatggagaaggataatcaagatttgcaacagaagatggaaaaggtttttcaaggaaca
gatgaacaactaagggatagataccagaaccaccagagaacggtgagggagaaagagaag
agattatcagactgtaagcgtgaattagatagagccactaaagaatgccagagatttaac
agtgagaaatcagaactacttattgaacgaggtcgtcttcaactgcaagcagatcgtcac
caagaacacatcacaatgagggattcattaattcagtctttggcagcacagctggaatta
gatggttttgagcgagcaccttttaatgaaaggcacgttaccagttttcacaggttgttg
aaggagagacaagaaagagatacagaagctgcaaatcgtttgatgagagaatttgcacaa
aaagaagcaatgaaacaaaaacagatagatgaaataagagacaagaaaactggattagaa
agaaccattgacctgaaattagatattcaaaataagaaacaagctgagctgaagaatgta
aaatgtgaattgcagcagttggagggtttttcagacagaattctggagttggatcaggag
attgtcaagacagaacatgagctggagaaggctgagaagaacagcaatgtagaaacactt
gaagtagaagtacgaactctgcaaaatgagaaaataaacctggacaaagctcttaggaag
ttggatcaagagatggaacagttgaatctacatactatgacaattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaagagcagatcagaaaagtaaaatcaaggcattct
gatgaactgaagtcactgttgggatactttccaaataaaaaccaacttgaagactggctt
catgttcaaaatagaaagattaatcagacaagggataatcttgctgaccttaacaaacga
ctggcatcagtagaatatcataaaacttatgtcggtaatgagctaaaaaaaaaagaagag
cagttgtcccttcatgaagcaaaactttttgatgtttgtggaagtcaagattttgacagt
gacctgaacaagcttcaggatgaaattgaaaagagttcaaaacagcgagctgtgcttgct
ggagccactgcagtttattcacagtttattacacaactgacagaggagaaccagtcatgt
tgtccagtttgtcaaagagtttttcaaacagaggccgaactgcaagatgtcatcagtgat
ctgcagtctaagctgcgtcttgctccagacaaactgaagtcaacagagtctgagcttaaa
agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccacttaggcgaactgtagtt
gaactccaagatagggacataccagacttgaggagcaagatacagaatgcaaacagggat
ttaacaggcctgaagagtgagatagaagaacagcaatcattcttgcagaaagctttgtct
caggaggatggtgccaaggcatgtttacaggatataacactaatggagaggtaccagact
gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaagtagaactgttctacaagtaagccatgaaaaacaagagaaaaagcacttgtgggat
acagttactggtaaaattgagttaaatcaaaaactcaagcaagaccagcagaatcagatt
cagcagctaaagagtgcagttaatgagcttaaagcagagaaacttcagatttccagcagc
atgcagcatcgtcgacaactggaggaacaaacagtggaattaaccactgaggttcagtcc
ttatgcagagagatcaaggaagcaaaagaacaggtatttcctttgaatgcaactttagaa
aaactgcagcaggagaaggaagaactaatgaacaaaaggactgcaagtaataaagaaacc
caagagaagataaatggcataaaagagaaagttaaggatataaacaagtatgtgaaagaa
attgaaaactatattcaacaaggaaaagacgactataaaaagcaaaaggagtgtgaactt
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagataagtaaggag
atggaaatgattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaaacggaatgaagagctaaaagaagttgaagacaatataagacaa
cttgtgaaggagatgggagaaatgaaagtcccacaaataaagaatgaacagaaacattta
gaggagaaaatagaatctctgaaaagaaaccatcatgttgcacttggtcgacaacgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaagtacagggagatgatgattgttatgagaacaacagagctagtgaacaaagat
ctggacctttattacaaggctcttgataaagcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggcgaagcacctacagaggacaagatatt
gaatatatagaaatccgttctgatgcagatgagaatgtctcggcctctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgcgaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtcttgctctagcagaaaca
ttctgtctcaactgtggcattttggcactagatgagcctactaccaatcttgatcgagaa
aacatagagtctcttgcacatgcccttatggagataataaaaagccgctcacaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaacttctgggccgttct
gaatacgtggaaacattctacaggataaagaagaacgttgaccagtgctctgagatcatg
aaatgcagcgtcagttccctaggctcatacattcattag

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