Astur gentilis (Northern goshawk): 126051877
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Entry
126051877 CDS
T08649
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126051877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126051877
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126051877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
126051877
NCBI-ProteinID:
XP_049687612
LinkDB
All DBs
Position
3:complement(18448952..18494051)
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AA seq
583 aa
AA seq
DB search
MSTGEVERLSADLGGAAGDEEEEWLYGDENEAERPEEEKASAPPPPGNEEDAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRAYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSATNKITAEDNAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKADF
TSPPALFKSGIPTNRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIESGHSSGYDGRSVRAFSYGSDNEVELKTNDLLKAMLSLASKADKQKVGSPLYFTFPH
FAGPAPSWSSLMDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRERTRDRERDRDH
SPTPSVFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRR
HDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctgtcggcggacctcggcggggccgccggagacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaagct
agtgctccacccccacctggaaacgaagaagatgcggcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgacgtt
caagtcaccataggggatattaaaacaggagctccacagtatggttatggagcagcacct
gtgaatctcaatattaagacaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggggtggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctctgattatttcaac
tatgggttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcagccacgaataaaattacggctgaagacaatgct
atggaagtaagaccaagtgcagagattctcgatggcagataccatctttttaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaagcagacttc
acatctcctcctgccttattcaaatcaggaattccaacaaacaggcgattatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gagaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttacc
aagccacctccatttttccctccaggagctccacctacccaccttccaccaccacctttc
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccaggctttccaccaccacctggcggtcctccaccttccctcata
cccacaatagaaagtggacattcttctggctatgatggtcgttctgttcgtgcattttca
tatggcagtgataatgaagtggaactcaaaacaaacgatttattgaaggctatgttatca
ttggctagcaaagcagataagcagaaagtgggaagtcctctgtacttcacctttccgcac
tttgcaggtcctgctccttcgtggtctagtcttatggacaccagcaaacagtgggattac
tatgcacgaagagagaaggatagggaacgtgagagagagcgatcccgagatcgggatcgg
gaccgggaccgagacagagatcgagaacgtaccagagacagggagagggaccgagatcac
agtccaactccaagtgtattcaacagtgatgaagaacgatacagatacagagactatgca
gaaagaggctatgaccgccatagaacaagtagagagaaagaagaccgacacagagacagg
agacacagagagaaagaagagactagacacaagtcatctcgaagtaacagtagacgtcgt
cacgacagtgaagaaggggacagccacagaaggcacaaacacaaaaaatccaaaagaagc
aaagaaggaaaagaagccagcggtgaacctgctcctgaacaggagaacactgaagctgcc
cctgtggaatag
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