Astur gentilis (Northern goshawk): 126052049
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Entry
126052049 CDS
T08649
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agen03021
]
126052049
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126052049
5.6.2.5 RNA 5'-3' helicase
126052049
Transcription machinery [BR:
agen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126052049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
SLFN-g3_helicase
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
126052049
NCBI-ProteinID:
XP_049688074
LinkDB
All DBs
Position
29:complement(16211059..16249963)
Genome browser
AA seq
2821 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHK
VLWELETSRLVARIKKSMREEAGEDDELFIVDENGDTQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQGHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSFSMIEKGKLILLPSHLYDTANYKNYWL
GICMLLTMLEEQAMDSLLLGPDKQNDFMQSILHTMERETADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSELESDYEDDMVTCSQIVYN
YNTEKPQKDNGWKTAICPDYCPNMYEDMQTLANLLQSDIGRDMRVHDSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKHILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHYVRGSSAVSLQASNIAQHSCVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQMCLKQVLRSMKDRALNTS
VPEGNNANSTTLPAISIKQEKSAHGGDDLCSPFAVILNEGGGEDCQENLLPRRKSAWEEE
CRDASKSSRSWTSTEGLLVNIKKEHNDLTTQEYVCPQNPLAEKVSGKVQGNRNNDLVAGK
CDMDNQGFNPDAQYSDSRRGGELENKCEAGPGTVMHLAAQTCIGSPEHVYSSDVKESSMS
PSSSSKFKVDVHRLMNLKNMVQKTEWPSKVSQLVKTRDLRKCSLAASASKAEVERPKFCT
GSLCTSKDCHKHWGVNTVRENEISVGTPSSRSCESTQEKSVNSAFQSRLVPTKQVSKETP
LDCSSSSKNEPGMQENGDDCILLSGIRDTLLKKVSTEEKSGSLLKSVFRKDAVMQTSDRE
QPHLNNLVKYDSKDQISKTFCMDKASANGRVPSSSENKRDISNPASQIRPLSVKCESSDR
LFEFSEYFKRENNSMGKKEEDFAKMVSEDDTLTDSQVDRELGKLSLAAYAKSVNFPFDSG
QASSVHHNVCDIKRKVKGAVRSSNDGQSTKSPCDADCLDNQVIIISDSSDEEKGVADKEE
TKKTNENVCPEKQPSTSSCISDSDSKTESKTPSCHLSLEDCESQYFEFETEFDVFSVWQD
TQAYSTEATQEYKQDRVSALVDSSKSDGLLNDHTNEWGYDPDYVSDDAMEEEANLIEKQV
ENISHEKEADNTKEVTNSTLQESISKGDAKDQLENFADKGAVAKDFTLGSRLNEPRPSTS
NISLASKLALKKNSVSPQKNIAKSKVARTIQRSPKKPPLLKTAQNKKILQNTSKNSQPGR
SMPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLESITQLRSHGKAAGRVGVV
QKQKIKLIAPQSLSVKHNKKLLACQDLQFFRQTRPQKSVRVKNPAGSSESRNKKVSNVDA
RSMKQKPESFELVSVERLVENQREKKREETLCPSPSEIKFKSHLWEEEATCVSKMPGSSD
SNRKSEDNSMMVPPVPMDSSLSSTALVGDDKDEPLGRGCIVQPECEKTTSRENGCKQNEN
GEDDDGLFLTQLDPVDMELCSEEESVQDTARGSEKTEETDTAENLQENESSTVVKCKYKD
CMEKVEKPAEYCSKHSATSSEADHLFAKPSLPLPSKTRKPSTTKTFSSASSSRNAAFSKD
LEDVEKLPPASKSKVNTVRPVVRPPNAKAIPIGNQTCKSPSFNNVPQPCVSNNILQSQNR
QNDNASNISRRPAREAYYSSFLGAQQRDHRIFVNEVLQWTYEMFANSSQFGPPSDLLQSV
AGSVPVQFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFCLQNFCADLNTAD
FTAQFQESDLARQLHPKEDDLIFLVVRKKKDTFREESEMENHIVNHVGLVTRFSRASGCL
TRQKEQHTVCHLSVKTRGNLSFFINKQVKCVVVGSLVTTDRTFKGLLLLSRSPLAKPIIN
PSYNDFCPRDLPITSESAASDMKEYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGTGK
SKTIVGLLSRVLRENIRKEKTTQKTNSKIKPNRFLVCAPSNAAVDELMKKIIVAFKEKCQ
NRQEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKKKTALDQ
KLDMLSRQRAMYRCEKREVSQMLDDEIGRLSKERQQLASQLKEVRRHSQKVQTDIILESD
IICCTLSTSGGSLLESAFLRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPR
QLPPTVKSVKAQEYGYDQSLMARLHRHLEEQVRKNVLRSLPVVQLTVQYRMHPDICLFPS
NYVYGRTLKTDKATEENRCSSEWPFQPYLIFDVGDGREERENDSFSNPQEVKLVVELIRT
IKEKRKDLGLRRIGIITPYSAQKKKIQEQLDRVFRNNSPGEVDTVDAFQGREKDCIIVTC
VRANSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQKRGAIIK
TSEKSYRKDAVKILKLNATVQPSTKAGTKKSALLQACPSSSKRGELANPREAHSSRELAA
GAGRAVPQGSRGPQQPQRAQAADSRRGSASAPVEAAALPADQEKPRDPRLASMASRTETK
GKDQASKDSSRSAQSNAGSTSQQGLDVSSAARGQIFRTETPKKPQQPMGQYDMPSTSPYA
ARHESDQGAPVSKSSSKAHSEGGQNNSSKWNKEYQVLTRRTSEESPENTESNSAKRRKTS
H
NT seq
8466 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaagagc
tatgcttctaaacggttgtccccggaagatcttgaaggatccaatgatgatctctgttac
tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcataag
gtcttgtgggagttggaaacctcccgtcttgttgcccgcatcaagaaatccatgagggaa
gaagctggagaagatgatgagttgtttatagtggatgagaatggagatacacagctgtct
ggttatgtgggcccagattttgagaataacctgcgagtgccccttctagaaatactgaaa
tatccatacctgctgctgcatgagaaagtcagtgagctgtgtgtagaagtgctctgtaga
atggaacaaggtcacagctcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtacacccgaatgaagtgattcgtcgatgggctatcctaacagcaaggaatttaggg
aaggttgacagggatgattattatgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttgggtctttttgagagtccagatatttacagcttttcaatgattgaaaagggt
aaactcatccttctgccatctcatttatatgatactgccaactacaagaactattggcta
gggatttgtatgttgctaacaatgttggaagagcaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtccatacttcacaccatggagagagaaacagct
gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaactggagtcagactacgaggatgacatggttacttgcagtcagattgtgtataat
tataacacagaaaagcctcaaaaggataatggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacactggctaatttgcttcagtctgatattggc
agagatatgcgtgtccatgacagcacatttctgtggttcatcccttttgttcagtcgctt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg
gaaatcaaacatattctcaatgaaagaatccagcagtgcgacaaaatctctgaatttttt
ctcctgatcttggtgtcgattattgaactacacagaaataaaaagtgcctgcatttgctg
tggattagctcccaagaatgggtggaagcagtggtgagatgtgctaagcttccagctata
gcatttacacggtgcactgaaaaagcatctggacactatgtgagaggttcatcagcagta
tctttacaagcttctaacattgcgcagcactcctgtgtgcagttgatacgcagccttctt
agagaaggctatcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat
cttcttctgcgaggaaatctgtctttaggttggcagctgaacatccaggaaacccaggaa
ttacaaatgtgtttaaagcaagttctaagaagtatgaaggacagagcattgaatacctct
gtgcctgaaggaaacaatgcaaactccacaactttgcctgccatttccataaagcaagag
aagagtgcacatggtggagatgacctttgttcaccatttgctgtcatattgaatgaaggt
ggaggtgaagattgtcaagagaaccttctccctagaagaaagagtgcctgggaagaggaa
tgtagagatgcatctaaaagttcaagatcttggacatccacagaaggcctcttggtgaat
attaaaaaggaacataatgacttgacaactcaggaatatgtttgcccacagaaccctttg
gcagaaaaagtatctgggaaagttcagggaaataggaacaatgatcttgtggcagggaaa
tgtgatatggataatcagggctttaatccagatgcccagtactcagattccagaagaggc
ggagagttggaaaacaaatgtgaagcaggaccgggaacagtaatgcatctggctgctcaa
acttgtattggttctccagaacatgtttacagctcagatgtaaaggaaagcagtatgtct
cccagttcctcttcaaagtttaaagtagatgtgcatagactcatgaatttgaaaaacatg
gtacagaaaactgaatggccctcaaaagtatcacagctagtgaagacacgtgacttgaga
aaatgcagtttagcagcaagtgcttcgaaagcagaggtagagcgacctaagttttgcact
ggctctctgtgtacaagcaaagattgtcataaacattggggagtgaatactgtgcgtgaa
aatgaaatctctgttggtactccatcttcaaggagttgtgaaagtacacaggagaaaagt
gtcaacagtgcttttcaatccagactggttccaactaagcaggtatcaaaagaaacacca
ctagattgctctagctcctctaaaaatgaacctggtatgcaggaaaatggagatgactgt
attttgctttcagggattagagacaccttgctgaaaaaagtatccactgaagaaaaatca
ggttcattgttgaaatctgtgttcaggaaggacgctgtcatgcaaacttcagaccgggaa
cagcctcatttaaataacttggttaaatatgactctaaagatcaaatttcaaagacattt
tgtatggataaagcttcagcaaatggtcgtgttccatctagctctgaaaacaagagggat
atatccaaccctgcttctcagatcaggccactgtcagtgaagtgtgagtcaagtgacagg
ttgtttgaattttcagagtatttcaagagagaaaacaattcaatggggaagaaggaggag
gattttgcaaagatggtttctgaagatgatactttaacagactcccaggttgatagagaa
ctcggtaaattatctttagctgcatatgccaaaagtgtcaattttccctttgattcaggc
caagcaagctccgtacatcataatgtttgtgatattaaaaggaaagtgaaaggtgctgta
agatcttccaatgatggccaaagtaccaagtctccctgtgatgcagattgccttgacaat
caagtcattataatttcagactcttctgatgaagaaaaaggtgtggctgacaaggaggaa
acaaaaaaaacaaatgaaaatgtgtgtcctgaaaagcagccttcaacttccagttgcatt
tctgatagtgatagcaaaacagaatcaaagactccaagctgtcacttgtcactggaagac
tgtgagtctcagtactttgaatttgaaacagaatttgatgtcttttcagtttggcaagat
actcaagcgtatagtacggaagcaactcaagagtataaacaagatcgtgtttcagcattg
gttgatagtagtaagtcagatggcttactgaatgatcacacaaatgaatggggttacgat
ccagattatgtaagcgatgatgccatggaagaagaagcaaacttgatagaaaaacaggta
gaaaatatttctcacgagaaagaagctgataatacaaaagaagtaactaattcgacattg
caagaatctattagtaagggagatgcaaaagatcaactggagaattttgcggacaaaggc
gctgttgctaaagacttcaccctgggctcaagattgaatgaacccaggccatctacatct
aacatctcattagcttcaaagttggcccttaagaaaaatagcgtgagcccacagaagaac
atagcaaaatctaaggtagcaagaactattcaaagaagtcctaaaaaacctcctcttctt
aaaacagcacaaaataaaaaaatacttcaaaatacatcaaaaaattctcaacctggcagg
tcaatgcctgctgtggttcctccgaggaaggttcgacagtgtcctgcaccagcatcaact
gtagaaaaacttggtctgaagaaggcaccccgcaaagcatttgaattatcccagcgctct
ttagagagcataactcaattgcgcagccatggtaaagctgcagggagggttggagttgta
cagaaacagaagattaaactaattgctcctcagagtttgtctgtaaagcataataaaaaa
ttgctagcctgccaagaccttcagttttttaggcagacaaggccccaaaaaagtgtcaga
gtgaaaaatcccgcaggaagttctgagagcagaaacaaaaaagttagcaacgtggatgca
agatctatgaaacaaaagcctgaaagttttgaactggtatctgttgaaagactggttgaa
aaccaaagagagaaaaaaagggaggagactctttgtccctctcccagtgagataaaattt
aaaagccacctgtgggaggaggaggccacctgtgtctctaaaatgcctggttcttcagac
tcaaacagaaaatcagaggataacagtatgatggttcctcctgtacctatggattcaagt
ctctcttccactgcacttgttggagatgataaagatgaacctttgggaagaggttgtatt
gtccagcctgagtgtgagaagacaacttcaagagaaaatgggtgtaaacaaaatgaaaac
ggtgaagatgatgatggtttatttttaactcagttagatcctgtggatatggaattatgt
tctgaggaggaaagtgttcaagatactgctagaggtagtgaaaaaacagaggaaacggac
actgctgaaaaccttcaggagaatgaatcctcgactgttgtgaaatgtaaatacaaagac
tgtatggaaaaagtggaaaaaccagcagagtactgtagtaagcattcagccaccagctca
gaagcagatcacttgtttgctaaaccttctctcccgctgccttctaaaacaagaaagcct
tccactaccaaaactttcagctcagcaagttcttcacggaatgcagccttcagcaaggat
ctagaagatgttgaaaagctaccgccagcttcaaaaagcaaagtgaatacagtgagaccg
gtggtcaggccaccaaatgcaaaggctataccaataggaaatcaaacatgcaagtctcca
agtttcaataatgtacctcagccctgtgtttctaataacattctccagtcacaaaataga
caaaatgacaatgcttcaaatatttccagaaggcctgcccgagaagcatattattcttcc
tttcttggcgctcagcagcgtgatcataggatttttgttaatgaagtcctacagtggact
tacgaaatgtttgcaaactccagccagttcggacctccaagtgatctcctgcagtctgta
gcaggctctgttcctgtccaatttcagggatacaatgactattttaatacgtttttcccc
ttgatgatgctaaatgcctttgaaacactggcacaagagtggatagaaaaccagagagtg
cgagagaagagttactacttctgcttacagaacttctgtgctgacttgaatacagcagat
tttacagctcaatttcaagaaagtgatttggcaaggcagcttcatccaaaggaggatgac
ttaatctttttggtggtccgaaagaaaaaagacacctttagggaagaaagtgagatggag
aaccacatagtgaatcacgttggtcttgtgacacgattttctcgtgcgtctggctgttta
actagacaaaaggagcagcatactgtctgtcatctttctgtgaaaactcgaggcaatttg
tcattcttcataaataagcaagtgaagtgtgtggtggttggatccctggtgaccacagac
cgaacattcaaaggcctactactattgagcaggagtcccctggctaaacccatcataaat
ccaagttacaatgacttctgtcccagagatttgcccataacttcagaaagtgctgcatca
gatatgaaagaatacaatgaagatcaaaagagagccattgagacagcttatgccatggtc
aagcaacatccagggcttcccaagatctgcctcatccacggtccacctggaacaggaaaa
tcaaaaactattgttggacttctgtctcgtgttttgagagaaaacattaggaaggagaag
acaactcaaaaaacaaattccaagatcaagccaaaccgttttctagtttgtgcaccatca
aatgctgctgttgatgaactcatgaaaaagatcatcgttgcatttaaggaaaaatgccaa
aacagacaggagcctttgggaaactgtggtgatatcaaattagtgcgacttggtgctgaa
aaagcaatcaacagtgaagtccggggatttagcctggataagcaagttgaacatagaatg
aaacgaaagccagctgactgtgaccaggatattcagaagaaaaagacagctctggatcaa
aagttggacatgctgtctcgtcagcgtgccatgtacagatgtgagaagagggaggtgagt
caaatgttagatgatgaaattggcagactttcaaaggagagacaacagcttgcttctcaa
ctaaaggaggttcggaggcactcgcagaaagtacagacggatatcatcttggagtccgac
ataatctgctgcacgctgagcacaagcggaggaagtctgctggaatccgcttttttgcgg
caaggccttgatcctttcagctgtgtcattgtggatgaggcagggcagtcctgtgaagtt
gaaacactgattccactgatccaccgctgtaataaacttgtccttgttggagatcccaga
cagctccctcctactgtaaaatcagtaaaagctcaggaatatggctacgatcagtccttg
atggcacgtctgcacagacacctggaggagcaagtgcggaagaatgttttacgaagcctg
ccagttgtgcagctgactgtgcagtacaggatgcaccctgacatctgcctcttcccatcc
aattacgtttatggcaggactctaaagactgacaaagcaacagaagagaacagatgttct
tcagagtggccattccagccctaccttatctttgatgtaggagatggtcgtgaggagcga
gagaatgactcttttagtaatcctcaggaagtgaagctggtggtggaattaataagaaca
attaaagaaaaaaggaaggatctgggtcttcgtcgcattggaataattaccccttacagc
gcacagaaaaagaaaattcaagaacaactggacagagtgtttaggaataacagcccagga
gaagtggacacagtggatgcgttccagggacgagagaaagactgcatcatagtgacatgc
gtccgggcaaacagcactaaagggtcaattgggtttctggcgagtctgcagcgtctgaac
gttacaatcacccgagccagattcagcctctttatccttggaagactgaaaacgctcatg
gaaaataaagactggaatgagttgattcaggatgctcagaaaagaggtgctattatcaag
acatcagaaaaaagctacaggaaagatgctgttaagattttgaagctcaatgcaacagta
cagccctcaaccaaagcagggacaaagaaatctgctctgttgcaggcttgcccttccagt
agcaagaggggggagcttgcaaatccaagggaggcccacagctcacgggaacttgctgct
ggtgctggccgtgcagtgccacaaggaagcagagggccccagcagccacagagggctcag
gctgcagactccaggagaggcagtgcctccgcaccagtggaggctgcagcgcttcctgct
gatcaagagaaaccacgggacccaaggctggcaagtatggcgagtagaactgaaacaaaa
gggaaggaccaggcctcaaaagacagcagtcggtcagcccagagcaatgcaggatcaacg
tcacagcaaggcctcgatgtgtcctcagctgccaggggtcagattttcagaacagaaact
cctaagaagccccagcaaccgatggggcaatatgacatgccttccacgtcgccttacgca
gctcggcacgagagtgaccagggagctcctgtatcgaaaagcagttcaaaagcccacagt
gaaggaggtcaaaataatagcagtaagtggaacaaagagtatcaagttttaacgaggaga
acatcagaggaatcaccagagaacacggaatcaaacagtgccaagcgaagaaagacctct
cactga
DBGET
integrated database retrieval system
