Astur gentilis (Northern goshawk): 126052551
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Entry
126052551 CDS
T08649
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126052551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agen03400
]
126052551
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126052551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
126052551
NCBI-ProteinID:
XP_049689330
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All DBs
Position
30:17433928..17449183
Genome browser
AA seq
1379 aa
AA seq
DB search
MSRQSTLLRFFPKASPAPPRPAVPAPAPAPAPVPPQAGAGTRRRVSGEQNGRQAAAAATT
TTTTTSPTAAASNGVPGRAAARRKEAGEKGGGDGAAAKAPSGSCEYSPGDLVWAKMEGYP
WWPCLIYNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGETQKGGM
FYSTKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEMEQMSESASGSSDD
CNSEEDVKSNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEVASSEEGSSGVDE
NESTDTETDAESVAESPIKVPSKRKRREINKPAKRSSLENEPSETPKRAATVSLEAKSKL
TSFAAPETFESQANACSGGTSGFAVWEHEKLDWLQEGKKKDAHRRRQSDPGYDPCTLYVP
EDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGAWAHS
GFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICRIITK
GTQTYSVLDCDPSENHNKYLLCVKEKDDSSGQRVYGVCFVDTSVGKFYVGQFSDDRHCSR
FRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEG
YFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELL
SLANFEEYVPVDIDTAKTTSPSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLER
IDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERL
LSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEELASD
FKSKILKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKAL
QDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVVSRNLPEEYELKSTRK
GYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLM
SLANYSQDGGGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKDE
DSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASD
RIMAGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKC
RTLFSTHYHSLVEDHSHNVAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFN
AARLANIPEEVIQKGHRKAKEFEKMTLSLRVFRYLCLVVDDATSDANAVQKLTAMINHL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagagcaccctgctccgcttcttccccaaggcctccccggcaccgcctcgc
ccggccgtaccggcacccgcacccgcacctgctcccgtccctccgcaggccggcgccggg
acccgccgccgcgtttcaggggagcagaatggccgccaggccgccgccgccgccaccacc
accaccaccactaccagccctaccgccgcggcgagcaacggtgtaccgggcagagcggcg
gcccggcgtaaggaggcgggggagaagggcggaggggacggcgcggccgccaaggccccc
agtggctcctgtgagtattcacctggtgacttggtctgggcgaagatggaaggttatcct
tggtggccgtgtctcatatacaaccatccgactgaaagaacaatagtcagaggaaaaggg
aaatccactcgtgtccacgtacagttttttgatgacagccctacaaggggctgggtcagt
attaaatatctgaggccatataaaggttcatcagatggggaaacacagaagggaggtatg
ttttatagtacaaagcctgaaattaagagagcaatggtgctagcagatgatgcaatgagt
aaagataaaactaagcggcttgaactggcagtatgcagtgaaccttcagacacagaggag
gaggaggaagaggaggaaatggagcagatgagtgaaagtgcatcaggcagcagtgatgac
tgcaatagcgaggaggatgtgaagagtaataagcgagtaatgagcagggaaagtgccata
aaagccaaaagaagaagagtgttggattctgacagtgatcatgatggttctgacgtagag
ttcaagcctgatgtgaaagaagtggcaagcagtgaggaaggtagtagtggggtagatgaa
aatgaatctactgacacagagacagacgcagagagtgtcgcagaaagccccataaaagtc
ccttctaaacgaaagagaagagagataaacaagcctgctaaaaggagtagcttagaaaat
gaaccttctgaaacgcccaaaagagcagcaacggtttctttagaagccaagtctaagctg
acatcatttgcagcacctgaaacttttgaatctcaagcaaatgcttgcagtggaggcacc
agtggctttgcagtatgggaacatgaaaagcttgattggctgcaggaagggaaaaagaaa
gatgcgcacaggagacggcagagtgaccctggttatgatccatgtactctgtatgtacct
gaggactatctcaacaagtgtacgccaggaatgcggaggtggtggcagctgaaaagtcaa
aacttcgatgctgtgattttctacaaagttggaaaattctatgagttgtatcatatggat
gcagtcactggtgtaaatgagttgggcctgatctttatgaaaggtgcttgggcccattca
ggttttccagaaactgcatttggcagattctctgatgttctagtgcagaaaggctacaag
gtagcccgtgttgagcaaacagaaactcccgaaatgatggaaacgcgctacaagtcaatg
gcccacccaacaaaatttgacaaggttgtacgccgagaaatatgcagaatcatcactaaa
ggaactcagacttacagcgttctggactgtgatccctctgagaaccataacaaatacctt
ctgtgtgttaaggaaaaagacgactcgtctggacaacgtgtttatggggtctgctttgtt
gacacgtcggtggggaagttttatgtaggccagttctcagatgaccggcactgttcgagg
tttaggactttagtagcgcattacactcctgtgcaggtactgtatgagaaggggaacctg
tctgtggacacacaaaagatactgaagggctcacttgtttcttgcattcaggaagggctg
atctctggttcccagttctggaatgcctctaaaacactaaaagtccttcttgaagaagga
tatttcaaggagaaacagaactctgaaaatggatgttctctgccctctgtaatcaaatct
ttgacttcagagagcgactcgctgggattaactcctggtgaaaacagtgaattagctttg
tcagctcttgggggatgtgtcttctatctcaaaaaatgcttgattgatcaggagctgtta
tcgctggcaaactttgaggagtatgtccccgtggatattgatactgcaaaaactacgagt
ccaagtagtttctttgccaaaactgaccagcggatggtgctggatggagtcaccctgatg
aacttggaagtcctgcagaatggaaccaacgggaccacagaaggtactttgttggaaagg
attgattcttgttgtacgccatttgggaagcgactcctgaaacagtggctctgtgctccg
ctttgtaatcctaaatccatcaatgatcgattagatgctgttgaggaccttctggcagtg
ccagataaaatgtctgaagttagcgagcacctgaagaaactgcctgaccttgaaaggctg
ctcagcaaaattcacagtattggatcgccacttaaaagtcagaaccatcctgacagcagg
gccatcttttatgaagaaatcaaatacagcaaaaaaaaaattgctgactttttgtctgca
ctggaggggtttaaagtaatgaatgaaattgttgatgtcatggaagaacttgccagtgac
ttcaaatctaaaatccttaagcagctggtcacccgcaaagccaaaaatccagatggccgc
ttcccagacttgagtgcagagcttaaaagatgggatactgcttttgatcataaccaagct
cgaaagacaggagtgattactccaaaggcaggttttgaccctgactacgataaagcacta
caggatattaaagctgttgaggaagatcttcacaagtacctggataagcaacgcaaactg
cttggattcaaatccatgctctactggggggcaggcaaaaaccgataccaaatggaaata
ccggaaagtgtagtatcacgtaatttacctgaggaatacgagttgaagtcaaccaggaaa
ggatataagcgttactggaccaaggagatagagaagatgctggctgccatggttaatgct
gaagagcgcagagatgcagcactaaaagactgtatgaggcgtttgttttacaactttgat
aaaaatagcaaagactggcagacagctgtggaatgcattgctgtgttagatgtcttgatg
tcccttgctaactacagtcaagatggtggtggaccgctgtgccgacctgtaattctactg
cctgtggatagcgctcctcccttcctggaacttaaaaattcacgccatccgtgtattaca
aaaactttctttggggatgattttattcctaatgacattgtgataggcagcaaagatgaa
gatagcagtagcgaagcttcctgtgtgttagtaactggcccgaatatgggtggcaaatct
acgctcatgagacaggcgggtctcctggttataatggctcaactgggatgctacgtacct
gctgaagtctgcaggcttacaccgattgacagagtatttacgaggcttggcgcctcagac
agaattatggcaggtgaaagtaccttcttcgttgaattgagtgagacttccagcattctc
cagcatgcaacagagcattcccttgtccttgtggatgaactgggcagaggcacagctact
tttgatggaacagctatagcgagtgcagttgtgaaagaacttgcagagaaaatcaagtgt
cggacgctgttctccacacactaccattcgctggtagaggatcattcacacaacgtggct
gtgcggcttggccacatggcatgtatggttgaaaatgagagtgaggatccaagccaggaa
acaattacattcctgtataagttcatcgaaggagcatgtccgaagagctatggcttcaat
gcagcaagacttgctaatattccagaggaagttattcagaaggggcacagaaaagcaaaa
gagtttgaaaaaatgaccctttccctgagagtatttaggtatctctgcctggtggtggat
gatgcaacaagcgatgcaaatgctgttcagaaacttaccgctatgatcaatcatctttaa
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