Astur gentilis (Northern goshawk): 126052556
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Entry
126052556 CDS
T08649
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
agen
Astur gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agen03019
]
126052556
Enzymes [BR:
agen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126052556
Messenger RNA biogenesis [BR:
agen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
126052556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
126052556
NCBI-ProteinID:
XP_049689341
LinkDB
All DBs
Position
3:3279750..3327304
Genome browser
AA seq
1832 aa
AA seq
DB search
MPESRSVMDSAEDHFKKVIHNDANENAGNDDKDSECSDSEKTGFIPKKEDKESGSTSDSD
EENETSDKAEAAVAQMLKEEEDREKEAEDPDYSNVYSISTTEEVTQQASQTEGEDFIVLQ
HERDSQSPEIRNHLEFLKKLRLHVWASLSRAQYVSLLKDFVESEFFVIDGDSLLLMFLDK
ETQYLNFFYQIECFLQDFTEKGAKYVIAFFQDAEQMYFPYPHFLFLRTALIEHLRHNTST
TVHTEFSSCLSSKWEIFLKKSYPYFIILSDIGLTSLQTDFLSILIAHSLSKKINVVLASG
QEYDILRVYGYHVQSVYKHRLFFQKYEQDLRCACENLVRSKEPLICLYEHLKLSLQSIQK
EVRQTVHLLKQLWPEGSDIRRVVCVLACAVGLKIYSNMLENANTSMGAKTEQSARGRSKP
LSPEAAADLCRMQCLAVTFLLHMPLSQRAQIRIMKSCWTKQVLPLIKMQQLCMHFALTQL
SDTNDWKLDLTYLPDLNDDLLLINLAHYYEVKYTEGLEFKKEMGKEMENEYQRLWDTVAK
LAVKYSFGDAFPIRKTSQLFLEQERTLFRDCEKEIPNIGLISVKSDLVEDYAGDVLKDLP
VLESNDPAVTSLIKYKEFDELCHWHSGRPLTEEYERVQCNADAKSRDPKERRQIQKLQTF
RHFYGSTLEDSTSKLIVCQDDVSGNANAAVKKTQRKHKSKAETIAEENNRRLKSKEEKKE
QEQWKALCIPTEKEIKANLTVGINKLEKFLKTLKSKSVKFSVEMTGLSACLEVWKEHCRE
QGNKSKDLRKAVQVMRRIHILLEKYQDLLEKRHLQKLTRYLRLLGFENLACSLSDSTGES
NDQNISNYAIEVGPARFQLQYMDYYLFREERNDPDPRVQHFIPDTWQRELLDAVDNNESA
VIVAPTSSGKTYASYYCMEKVLKTSNEGVVVYVAPTKALVNQVVGTIYNRFTKKLPDGLV
VCGVFTRDYRNDVMNSQILVTVPQCLEILMLSPRCQKWTKRIQYVIFDEVHCLGGEIGAE
VWEHLLVTIRCPFLALSATVSNPGHLTEWLQSVKRYWQRAENKIEGSSTNSEQNFTRNCR
VKSKVQEQKKSYRVRLVLYEERYNDLEKYVCSLKGSDFIIEHCHPCAALTVNHIENYGIP
SDLSLSPRESIQLYDTMVKVWQQWPRAQELDPEEFVSFKNKIVIKKADVRKYEQELKKEL
SKWIVLGQRQKVNELLEHLKPKPVDCSEQEKWKRFASFVDKLHEMDKLPAIFFIFNVDSV
ERAAKNVFLNLLKKQKSEQYPNTEREKERLSDELRKVKKMLIKFNPQDTRKLSSSKMENM
ALLLTTKQQLEKRLKRLTAIPSVCTYADPKAVDEDTLRKIFHRLRFERRGYLQQMMALRG
IGYHHGSMATKERQVVEMLFRLGYIKVVTATSTLALGINMPCKSVVFAEDSVFLDALNYR
QMSGRAGRRGQDMIGNVFFYDIPLPKVERLIKSNVPQLKGQFPLTVSLILRLMLLAAKAD
DKADAKAKALSVLKHSLMSFRKERNAEILKIYFMFSLQFLIKEGYLDQEGNPIGFAGLVT
HLYYYEPSNFVFVSFLVKGLFHKLCQPIKGSTVFSDDVLEKLVLILANLFGRKYLPACSM
KYKCTFCQSKVFLEDLPEDFADAVNEYNTKVQENFAHFLLTTAKLADMEQEYRLPLSKTD
FTSKNWHGSELASYLMDNTKSISAISPFACLSGVVDNDLFHGEVINKAVLRSLGINVTNC
PLLYLNKYDNRGRRRPLNAYALDFYKHGSLIALTTDNWLNEGDAYYALKDFSLLIKSIGT
SLSELCDDPNDNVLLAFQQLGEIYEKKLKCVT
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatcaagatctgtgatggattctgcagaagatcatttcaagaaagtcattcat
aatgatgcaaatgagaatgctggtaatgatgataaggatagtgagtgtagtgacagtgag
aaaacaggcttcattccaaaaaaggaagataaagagagtgggagtacaagtgacagtgat
gaggagaatgaaaccagtgacaaagcagaagcagctgttgcacagatgcttaaagaagag
gaagacagagaaaaagaagccgaagacccagattacagtaatgtttatagtatctcaacc
actgaagaagtgacacagcaggcatcacaaactgaaggagaggatttcatagttcttcag
catgaacgtgattcccaaagccctgaaataagaaaccatcttgaattcctgaagaagttg
aggctacatgtttgggcatccctatcaagagctcagtatgtcagtctgttaaaagacttt
gttgagtctgaattctttgtgatagatggggattccttactgctaatgtttttagataag
gaaacacagtatctaaacttcttctaccaaattgaatgcttcctgcaggatttcactgaa
aaaggagcaaaatacgtcattgctttcttccaggatgcagaacagatgtactttccgtat
cctcattttcttttcttacgtactgcattaatagaacacctgaggcataacacgagcacc
actgttcatacagaattttccagttgtttgtcatccaaatgggagattttcctgaagaaa
agctatccttacttcatcatcctatctgacataggactgacctctctccagacagacttt
ttatctattttaattgctcattcattgtccaagaaaatcaacgttgtgcttgcttcagga
caggagtatgatattcttagagtttacggatatcatgttcagagtgtgtataaacacaga
ttatttttccaaaagtatgaacaagatctgcgatgtgcctgtgaaaacctagtcaggagc
aaagaaccattaatatgtctatatgaacatctcaagctgagcctgcaaagcatacaaaaa
gaggttcgccagactgtccatctgttgaaacaactgtggcctgaaggatctgacattcgg
cgcgtggtctgtgttcttgcttgtgctgtgggattaaaaatatacagcaacatgttggaa
aatgcaaatacttccatgggagcaaagacagaacaatcggcaagaggaagaagtaaacct
ctatctccagaagcagcagctgacctctgtagaatgcaatgtcttgcagtgacttttctt
cttcatatgcctctttcacagagagctcagattaggataatgaaatcctgctggactaag
caagttttaccattaataaaaatgcaacagttgtgtatgcattttgctctgacacagcta
agtgatacaaatgattggaagttggatttaacttacctgcctgacttaaatgatgattta
ctgctcataaatcttgcgcattactatgaggtcaaatacacggaaggattagagttcaaa
aaggaaatggggaaagaaatggagaatgaataccaacgtttatgggacactgtagcaaaa
ttggctgtgaaatatagttttggagatgctttcccaatacgaaagacctctcaactattt
cttgaacaggaacggacattatttagagactgtgaaaaagaaattcctaacattggactg
atctcagtgaaatctgatcttgttgaagattatgctggagatgttttgaaagacctacct
gttctagaaagcaatgatcctgcagttacttctcttattaaatacaaggaatttgatgag
ctttgtcactggcattctggtagacctttgactgaggaatatgagcgagtacagtgcaat
gctgatgcaaaatccagagatccaaaagaaagaagacaaatacaaaagttacagactttt
cgtcatttttatggaagcactttggaagacagcacttcaaaacttattgtatgtcaagat
gatgtgtcagggaatgctaatgctgctgtcaaaaagacacaaagaaagcataaaagtaaa
gctgaaacaattgcagaggaaaataacaggcgactaaaatctaaagaagaaaagaaagaa
caggagcaatggaaagccttgtgtataccaactgaaaaggaaataaaagcaaatctgact
gttggaataaataaattggagaaatttctcaagacccttaaaagtaaatctgtgaagttc
agcgtagaaatgacagggctgtctgcctgtttagaagtgtggaaggaacactgcagagag
caaggtaacaaatctaaagatttaaggaaagctgttcaagtcatgaggagaattcatatc
ctccttgaaaaatatcaagacctcttggagaaacgacatctacaaaagctgaccagatac
ctaagacttcttggatttgagaatttggcatgctctctatctgactcgacaggagaaagt
aatgatcagaatataagcaattatgctatcgaagtgggtccggctcgctttcagctacaa
tacatggattattacttgttcagggaagagagaaatgatccagatccccgagtgcaacat
ttcataccagacacgtggcagcgagaacttcttgatgctgtagataataatgagtctgca
gtgattgttgctcccacttcatcaggaaaaacatatgcatcttactattgcatggaaaaa
gttctgaaaacaagcaatgaaggagtagttgtgtatgttgctcctacaaaggcccttgta
aaccaagtggtgggaactatatacaatcgattcaccaagaaacttccagatggattggta
gtgtgtggagtcttcacgcgagattatcgcaatgatgtcatgaattctcagatattagtg
actgtgcctcaatgtttagaaatcttgatgctgtctcctcgttgtcagaaatggaccaaa
cggatacaatatgttatatttgatgaggtccattgtcttggtggtgaaattggagcagag
gtttgggagcatcttctggtaacaattcgatgtccgtttttggcactttctgctactgtc
agtaacccaggacacctaactgagtggttacaatctgtgaaaaggtattggcaacgtgct
gagaataaaatagaaggaagctctacaaactctgaacagaactttacaagaaattgtaga
gtgaaatctaaagtacaagaacaaaagaaatcatatcgtgttagactggttttgtatgaa
gaacgatacaatgatttggaaaagtatgtgtgttctctaaagggcagtgattttatcatt
gaacattgtcatccatgtgctgcattaacagtcaatcatattgagaactatggtattcct
tcagatctttctctgtctccacgagagagcatccagctttatgacacaatggtaaaagtc
tggcaacagtggccaagggcacaggagctagatcctgaggagtttgtctctttcaagaat
aaaatagtaatcaaaaaggcagatgtgagaaaatatgaacaggagctgaagaaagaacta
agcaagtggattgtgcttggccaaagacagaaggtgaatgagctactggagcaccttaaa
ccaaaacctgtggattgctcagaacaggaaaagtggaaacgttttgcaagctttgttgat
aaattacatgagatggataagttgcctgccatattttttatatttaatgtggattcagtg
gaacgtgcagccaagaacgtattcctcaatttgctgaaaaaacaaaaaagtgaacaatac
cctaatactgagagggaaaaagaacgtttaagtgacgaattaagaaaagtgaaaaaaatg
ttaataaaattcaaccctcaggataccagaaagttgagctccagtaaaatggaaaacatg
gcgcttcttttgactacaaagcaacagttagaaaaacgacttaaaaggctaactgctatc
ccttctgtgtgtacttatgctgatcctaaagcagtggatgaagatactttgaggaagatt
tttcatcgacttaggtttgagagaagaggttatctgcagcaaatgatggcactgaggggc
attgggtatcatcatggatctatggccacgaaggaaagacaagtagtggagatgcttttc
aggctgggatatatcaaggtagtcacagctacttcaacacttgctctaggaatcaacatg
ccgtgcaaatctgttgtctttgctgaagattctgtgtttttagatgccctaaattacaga
cagatgtcaggacgtgctggaagaaggggacaagatatgattggaaatgtgttcttctat
gatatcccactgcccaaagttgaaagacttattaaatccaatgtacctcaattgaaaggc
cagtttcctctgactgtttccttaatattgaggctcatgctgttggctgcaaaggctgat
gacaaagcagatgccaaagcaaaggcactgtcagtgctgaagcactcactgatgtcattc
agaaaagaaagaaatgctgaaatattaaaaatttattttatgttttccttgcaatttctt
atcaaagagggctacttggatcaagaaggtaaccccataggctttgctggacttgtgaca
cacttgtactattacgaaccttcaaattttgttttcgtaagctttcttgtgaaaggttta
ttccacaaattgtgccagccaatcaaaggctcaactgttttttcagacgatgtcctggaa
aagctagtgcttattctagcaaacctatttgggagaaaatatcttccagcctgctcaatg
aaatacaaatgcacattttgccagtcaaaggtctttctagaagatctgccagaagacttt
gcagatgctgtaaatgagtacaacaccaaagtacaggaaaattttgctcattttcttctg
acaactgccaaactggcagatatggaacaagaatacagacttccactgtcaaagacagat
tttacatctaagaattggcatggctctgaactagcatcttatctgatggacaacaccaaa
agcatatctgctatctcaccctttgcatgtttatctggagtggttgataacgacctattt
cacggggaggtcattaataaagctgtcttacgttcccttggaattaatgtcacaaactgc
cccctgctttacttgaacaaatatgataatcgagggaggaggaggccactcaatgcatat
gcactggacttctataagcatggttccttgattgcactgacaactgataactggttaaat
gaaggcgatgcttactatgcactcaaggatttttcactcctcattaagtctattggaaca
tcgctgagtgaactgtgtgatgatccaaatgataatgttctactggcatttcaacaactg
ggtgaaatctatgaaaagaaactcaagtgtgtcacctga
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integrated database retrieval system
