Astur gentilis (Northern goshawk): 126052746
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Entry
126052746 CDS
T08649
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
agen
Astur gentilis (Northern goshawk)
Pathway
agen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126052746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agen03400
]
126052746
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126052746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
126052746
NCBI-ProteinID:
XP_049689799
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Position
30:17210452..17266059
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AA seq
936 aa
AA seq
DB search
MAVEPPREVAWPEGAGAEAGFVRAVLSLPEKPDTTVRFFERGDYYTAHGADARLAARELF
RTRAVIRQLAGAPGTQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSKSIKENDW
YLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTTDGQRVVGVGYVDATLRKLSVCE
FPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKADFTTKDI
VQDLNRLLKSKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLS
QYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKNRIE
ERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPGV
VEALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLVKASFDPN
LTELREKMNELEEKMQSFLKSAAKELGLEAGKSIKLETNSQFGHHFRITCKEEKVLRNNS
KYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAEPIQTMND
VIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKGARHPCIEVQDEVAFIPNDVTF
EKGKQMFHIITGPNMGGKSTYIRQTGVIILMAQIGCFVPCDSAEITIVDCILARVGAGDS
QLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYIASKICAF
CMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFP
KHVIESAREKALELEEFQNIGKSKESEGEPPAKKFYKEREEGEKIIQDFLCKVKALPLTD
MSEDDIKIKLKQLRNDVLAKNNGFVNEIISRTKVTS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagccgccgcgggaggtggcgtggccggagggcgcgggggccgaggcgggc
ttcgtgcgcgccgtcctgtcgctgcccgagaagcccgacaccaccgtgcggttcttcgag
cgcggcgactactacacggcgcacggcgcggacgcgcggctggccgcccgcgagcttttc
cgcacccgcgccgtcatccgccagttggcgggggcaccgggaactcagaagcttgagagt
gttgtgcttagtaaaatgaactttgaatcttttgtgagagatctgcttctggttcgtcat
tacagagttgaagtttacaagaacaaagcagggagtaaatctatcaaagaaaatgactgg
tatttagcatacaagggttctccaggaaatcttgcccagtttgaggaagttctctttgcc
aacaatgacatgtcaacagccattggggttgtgggtgttaagctgtctactactgatgga
caaagagtggtaggagtggggtatgtcgacgctacgctgagaaaattgagtgtctgtgag
tttccagataatgatcagttctcaaaccttgaagctctactggttcaactaggaccgaag
gagtgtgtgctaccgggaggagagactgcaggagaaatgggaaaactacgacaagtcatt
cagaggggaggaatcctgattacagacaggaagaaggcagatttcacaacaaaagatatt
gttcaggatctcaatcgcttgttaaaatcaaaaaaagaagaacaaatgaatagcgcagca
ttgccagagatggaaaagcaggttgctgtttcatctttgtcggccattatcaagttttta
gagttgctgtcagatgaatctaattttggacaatttgaactgactacttttgatcttagt
caatatatggttctagataatgcagctgttcaagccctcaacctttttcagagttctgtg
gaaaatgctaatactgcacagtctctagctggtttactaaataaatgcagaacccctcaa
ggacaaagactagttaatcagtggatcaaacaaccacttatggacaagaatagaattgaa
gaaaggttgaatttggttgaagcttttgtggtggatccagaactacgtcagtgccttcaa
gaagatctcttacgtcgcttcccagatcttaaccgtctggcaaagaaatttcagagacaa
gcagcaaacttacaggactgttaccgaatgtatcaggctattaatcaactgcctggtgtt
gtagaagcactagaaaaacatgaaggagctcaccagatgttgttgttggcagtgtttata
acacctcttaatgatatctactctgacttctcaaagtttctggagatgatagaaacaaca
ttggacatggataaggtggagaatcatgaatttcttgtcaaggcttcttttgaccctaat
ttgacagaattaagagaaaagatgaatgaactggaagaaaaaatgcaatcctttttaaag
agtgcagccaaagaactaggtttggaagctggcaaaagtatcaaactggagacaaattca
cagtttggacatcactttcgaataacttgcaaggaagaaaaggttctccgtaacaattca
aaatatggaatagttgatacacagaagaatggtgtgaaatttactaacagcaaactgagc
tccgtcaatgacgaatatataaagaacagagaagagtatgaagaggctcaggatgcaatt
gtcaaggaaatcattaatattgcttcaggttatgcagaaccaatacagacgatgaatgat
gtgatagctcaattagatgcaattgtcagttttgctcacgtgtcaaacggagcaccagtg
ccgtatgtccgtcctgtcattctggaaaagggacaaggaaggattgtgctgaaaggtgcc
aggcatccttgcattgaagtgcaagatgaggtggccttcatccccaatgacgttacattt
gagaagggcaagcagatgttccacattattactggccctaacatgggggggaaatcaacc
tacattcgacagacgggggtgattattcttatggcccaaattgggtgttttgtaccatgc
gactctgcagaaataaccattgtggattgtatcctggctcgggtgggagctggagacagt
cagctgaaaggcgtgtctactttcatggctgaaatgttagaaactgcttcaatccttagg
acagcatctgaaaactccctgataatcatcgatgagctgggaagaggaacttctacctat
gatggttttggcttagcatgggctatttcagaatacattgctagcaaaatctgtgctttc
tgtatgtttgctacacattttcatgaactgacagctcttgctgaccaagtgccaacagta
aataacctacacgttactgctctgaccagcgatgacacgctgacgatgctttatcgtgtc
aaggaaggtgtttgtgaccagagttttggaatacatgtagcagagttggcagctttccca
aaacatgtgatagaaagtgcaagagagaaagcattggaattggaggaatttcaaaacatt
ggcaagtccaaggaatctgaaggagaaccaccagccaagaaattctacaaagaaagagag
gaaggtgaaaagataattcaggattttctttgtaaagtgaaagcattgcccctgacagat
atgtcagaagacgatatcaaaatcaagttgaaacagctgagaaatgatgtgttggcaaag
aacaacggttttgtgaatgaaatcatttcccgaacgaaagttacatcatga
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