Agromyces protaetiae: ET445_02275
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Entry
ET445_02275 CDS
T05835
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agf
Agromyces protaetiae
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agf03032
]
ET445_02275
03400 DNA repair and recombination proteins [BR:
agf03400
]
ET445_02275
Enzymes [BR:
agf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ET445_02275
DNA replication proteins [BR:
agf03032
]
Prokaryotic type
DNA Topoisomerases
ET445_02275
DNA repair and recombination proteins [BR:
agf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ET445_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QAY72336
UniProt:
A0A4P6F9U2
LinkDB
All DBs
Position
498925..499983
Genome browser
AA seq
352 aa
AA seq
DB search
MPRLTRVEPYTSPGWTRVRRGGGFSYVGPHGERASARDRARFAELAVPPAWKDVWIADAA
NAHLLAVGVDAAGRRQYLYNPIWRERQDIEKFDRMVLLARVLPEARLTAERELSVGLAEH
GLEEHRVLAAAFRTLDLGALRVGSEESLAAARHRGLTTLLVRNATVETRGAASADATAHP
PVVRFRFRAKDGIAQDLSVGDAALAGFVTLARERAASARLYAWRAEHTRRHRALTAAEVN
DDIRRRTGGDFTAKDFRTLRGTIVAAERLAEIGVESSARARAAAMRDAVVATSVALGNTP
AIAKASYVDPRVFTAYDRGVVLSRRGAAERALIALVAADAESAPGVEAGSAA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcctcacacgcgtcgagccgtacacgtcgccggggtggacgagggtccgccgc
ggcggcggcttctcgtatgtcggcccgcacggcgaacgcgcgagcgctcgtgatcgagcc
cggttcgccgagttggcggtgcctcccgcgtggaaggacgtctggatcgccgatgccgcg
aacgcgcatctgctcgccgtcggcgtcgacgccgcaggacgtcgccagtacctctacaac
cccatttggcgggagcgacaggacatcgagaagttcgatcggatggtgctgctcgcacgt
gtcctgccggaggcgcgcctgaccgcggagcgggaactctcggtcggcctcgccgaacac
gggctcgaagagcatcgagtgctcgccgcggcgttccgcaccctcgacctcggagcattg
cgcgtcgggtcggaggaatcgctcgcggctgcccgccaccggggtctcacgaccctgctc
gtgcggaatgcgacggtggagacgcgcggggcggcgagtgccgacgcgacggcccacccg
cccgtcgtgcggttccgcttccgcgcgaaagacgggatcgcgcaagacctcagcgtcggc
gatgcggcgctcgcggggttcgtcacgctcgcgcgcgagcgcgccgcatccgcccgcctc
tacgcctggcgagccgagcacacccgtcgccaccgggcgctcacggccgccgaggtcaac
gacgacatccgtcgccgcacgggcggcgacttcaccgcgaaggacttccgcacgctgcgg
gggacgatcgtcgcagccgaacggctcgccgagatcggtgtcgagtcatcggcccgggcg
cgcgctgcggcgatgcgcgacgccgtggtcgcgacctccgtcgccctcggcaatacgccc
gcgatcgcgaaagcgagctatgtcgatccgcgcgtgttcaccgcctacgatcgcggggtc
gtcctctcgcgccgcggcgcagcagagcgcgcgctcatcgcgctcgtggcggcggacgcg
gaatccgcgccgggagtcgaagccgggtcggcggcctga
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