KEGG   Agromyces protaetiae: ET445_04370
Entry
ET445_04370       CDS       T05835                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
agf  Agromyces protaetiae
Brite
KEGG Orthology (KO) [BR:agf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agf03032]
    ET445_04370
   03036 Chromosome and associated proteins [BR:agf03036]
    ET445_04370
   03400 DNA repair and recombination proteins [BR:agf03400]
    ET445_04370
DNA replication proteins [BR:agf03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ET445_04370
Chromosome and associated proteins [BR:agf03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ET445_04370
DNA repair and recombination proteins [BR:agf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ET445_04370
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG bHLH_STRA8 PSF3_N
Other DBs
NCBI-ProteinID: QAY72694
UniProt: A0A4P6FA69
LinkDB
Position
936552..936839
AA seq 95 aa
MADKSLNKTELVAKIAASTNQSQATVDAVLGGLFDALAEAVGSDTKVSIPGWLAVERTSR
AARTGRNPQTGETIQIPAGHSVKVSAGSKLKAAAK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggctgacaagtcgctgaacaagaccgagctcgtcgcgaagatcgccgcgtcgacgaac
cagagccaggccacggtcgacgccgtgctcggcggtctcttcgacgcgctcgccgaggcc
gtcggctccgacaccaaggtctcgatccccggctggctcgccgtcgagcgcacgtcgcgc
gctgcccgcacgggccgcaacccgcagaccggtgagaccatccagatcccggccggtcac
tcggtcaaggtctcggccggctcgaagctcaaggctgccgcgaagtaa

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