Agromyces protaetiae: ET445_05785
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Entry
ET445_05785 CDS
T05835
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agf
Agromyces protaetiae
Pathway
agf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET445_05785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agf03019
]
ET445_05785
03400 DNA repair and recombination proteins [BR:
agf03400
]
ET445_05785
Enzymes [BR:
agf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ET445_05785
Messenger RNA biogenesis [BR:
agf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET445_05785
DNA repair and recombination proteins [BR:
agf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ET445_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
KORA
Motif
Other DBs
NCBI-ProteinID:
QAY72927
UniProt:
A0A4P6FGG2
LinkDB
All DBs
Position
complement(1242219..1244345)
Genome browser
AA seq
708 aa
AA seq
DB search
MTTNAPASAAAPGTDTRAAALAALRELVGRDDVDFHEGQFEAIQALVEGRRRALVVQRTG
WGKSAVYFVSTLLLRRAGAGPTVLVSPLLALMRDQIAAAERAGVRAVSINSTNAHEWGDV
LQKLDADEVDVLLVSPERLNNPSFRDESLPALVARIGMLVVDEAHCISDWGHDFRPDYRR
LRELISQMPAGVPVLATTATANSRVVADVAEQLGGSDVLTIRGPLARASLRLGVLRLPNS
ASRLAWLINHLDDLPGSGIIYTLTVAAAEDTARVLRERGHDVRAYTGQTDTDERAESEDL
LKRNGVKALVATSALGMGFDKPDLGFVLHLGAPSTPVAYYQQVGRAGRATESADVLLLPG
VEDRDIWHYFATASMPDEDRAARVLAALAPDRPTSTVALEAMVDIRRTPLELLLKVLDVD
GAVARVQGGWVATGEPWAYDADRYRRIAAERLAEQQHMLDYETTSACRMEFLQRTLDDDT
AAPCGRCDSCAGAWYPTAVASDASEAASAALDRVGVPIEPRKQWPTGADRLGVSAKGRIA
PGEQAAEGRALARLTDLGWGGTLRELFAAGAADAPVSPRVLDACVRVLAEWGWAERPVAV
AAMPSRSKPLLVDSLARGLARVGRLPYLGALDFRDGGPTGRPGGNSAYRLAGLWNRFSAD
ALDVSTASGPILLVDDLADSRWTLTVAARELRLAGASAVLPFALALRG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacgcccccgcctccgccgccgcacccggcaccgacacccgcgccgcggcg
ctcgccgcgctgcgcgaactcgtcggccgcgacgacgtcgacttccacgaggggcagttc
gaggcgatccaggcgctcgtcgaagggcgccgccgtgcgctcgtcgtgcagcgcacgggg
tggggcaagtcggccgtctacttcgtctcgaccctgttgctgcgacgtgcgggcgcgggc
ccgacggtgctcgtgtcgcccctcctcgcgctcatgcgcgaccagatcgccgccgccgag
cgcgcgggcgtgcgagccgtgtcgatcaactcgacgaacgcccacgagtggggcgacgtg
ctccagaagctcgacgccgacgaggtcgacgtgctcctcgtctcacccgagcggctcaac
aacccgtcgttccgcgacgaaagcctgcctgcgctcgtcgcacgcatcggcatgctcgtc
gtcgacgaggcgcactgcatcagcgactgggggcacgacttccggcccgactaccggcgc
ctccgcgaactcatctcgcagatgcccgcgggcgtgcctgtgctcgcgacgaccgcgacc
gccaacagccgcgtcgtcgccgacgtcgccgagcagttgggcggctccgacgtcctgacc
atccgcgggccgctcgcgcgcgcgtcgctgcggctcggggtgctgcgcttgccgaactcg
gcgagccgactcgcgtggctcatcaaccacctcgacgacctgcccgggtcgggcatcatc
tacacgctcacggtcgccgccgccgaagacaccgcgcgcgtgctgcgcgagcgtgggcac
gatgtgcgcgcctacaccggccagaccgacaccgacgagcgagccgagtccgaagacctc
ttgaagcgcaacggcgtcaaggcgctcgtggcgacgagtgcgctcggcatggggttcgac
aagcccgacctcgggttcgtgctacacctcggggctccgtcgacgcccgtcgcgtactac
cagcaggtcggccgtgccggccgcgcgaccgagagcgccgacgtgctgctccttcccggc
gtcgaagaccgcgacatctggcactacttcgcgacggcgtcgatgcccgacgaagaccgc
gctgcgcgcgtgcttgcggcgctcgcccccgaccggccgacctcgacggtcgcgctcgag
gcgatggtcgacatccgccgcacgcccctcgaactgctcctcaaggtgctcgacgtcgac
ggcgccgtcgcgcgtgtgcagggcggatgggtcgccacgggcgagccgtgggcgtacgac
gccgaccgctaccggcgcatcgccgccgaacgcctcgccgagcagcagcacatgctcgac
tacgagaccacgtcggcgtgccgcatggagttcctgcagcgcaccctcgacgacgacacc
gccgcgccctgcgggcggtgcgactcgtgcgccggcgcctggtacccgacggccgtggcg
tccgatgcatccgaggccgcgagcgccgcactcgaccgcgtgggcgtgccgatcgagccg
cgcaagcagtggccgacgggcgccgaccgcctcggcgtctcggcgaagggccgcatcgca
cccggtgagcaggctgccgagggccgcgcgctcgcgcgcctcaccgacctcggctggggc
ggcacgctccgcgagctcttcgcggcaggcgcagccgacgcgcccgtgtcgccgcgcgtg
ctcgacgcctgcgtgcgcgtgctcgccgaatgggggtgggccgagcggcccgtcgccgtc
gccgcgatgccgtcgcggtcgaagccgcttctcgtcgactcgctcgcgcgcgggctcgcc
cgggtggggcggctgccgtacctcggcgcactcgacttccgcgacggcgggccgaccggc
cggcccggcggcaacagcgcctaccggctcgccgggctctggaaccggttctccgcagac
gcgctcgacgtgtcgaccgcatcgggcccgatcctcctcgtcgacgacctcgccgacagc
cgctggaccctcaccgtcgcggcacgcgaactccgcctcgcgggggcatccgccgtgctg
ccgttcgcgctcgcgctcagagggtga
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