Agromyces protaetiae: ET445_06460
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Entry
ET445_06460 CDS
T05835
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agf
Agromyces protaetiae
Pathway
agf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET445_06460 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agf03019
]
ET445_06460 (recQ)
03400 DNA repair and recombination proteins [BR:
agf03400
]
ET445_06460 (recQ)
Enzymes [BR:
agf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ET445_06460 (recQ)
Messenger RNA biogenesis [BR:
agf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET445_06460 (recQ)
DNA repair and recombination proteins [BR:
agf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ET445_06460 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QAY73041
UniProt:
A0A4V0YH06
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All DBs
Position
1384473..1386503
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AA seq
676 aa
AA seq
DB search
MTDEPAPFHDFDEVPWDVDALVPPDDEWAAPPPDEWMPPAGASSPVRRAGAASGAAVASA
ARLGVAPARYATALDALRDVFGYDAFRGEQAAIIDQVAGGGDAVVLMPTGGGKSLCYQIP
ALLREGTGIVVSPLIALMHDQVDALVRNGVRAAYLNSSQQSFERAEVERAYLAGELDLLY
VAPERLNTEPTLRLLERGRIALFAIDEAHCVSQWGHDFRPDYLALSGLAERWPDVPRIAL
TATATEATHKEITERLSLERAEHFVASFDRPNIQYRIAPKIEVRKQLLDFVKSEGRDADG
NAVAGIVYALSRASTEKLADYLRQHGVDAMPYHAGLDAGVRRRTQERFLREDGVVVVATI
AFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGQPATAWLAYGLQDVVQQRRMIDE
SPGDLAFKRRLTAHLDAMLALCETVSCRRQNLLAYFGQQSAPCGNCDTCLEPPASWDGTV
ASQKLLSTIVRLQRERGQRYGAGHLVDILRGKRTPRVEQYGHDSLATFGIGDDLSDPQWR
GVVRQLLAQGLLQSVGEYGVLALTEASGAVLAGEHTVAFRTEPDRPVRGSSRRAAAPAAA
DLEHAQAELFEALRAWRAGEAKEQGVPAYIVFGDATLRAVATAKPASLADLDAITGIGAK
KREAYGEAVLRVVAAH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagcccgcccccttccacgacttcgacgaggtcccgtgggacgtcgacgcg
ctcgtgcctcccgacgacgagtgggcggctccgccgccggacgagtggatgcctcccgcc
ggcgcgtcgtcgccggtgcggcgtgcgggcgcagcatccggtgctgccgtggcatccgcc
gctcgtctcggcgtcgcgcccgcgcggtacgcgacggcgctcgacgcgctccgcgacgtg
ttcgggtacgacgcgttccgcggcgagcaggctgcgatcatcgaccaggtcgctggcggc
ggcgacgccgtcgtgctcatgccgacgggcggcggcaagagcctctgctaccagattccc
gcgctcctccgcgagggcacgggcatcgtcgtgtcgcccctcatcgcgctcatgcacgac
caggtcgacgcgctcgtgcgcaacggcgtgcgcgccgcctacctcaactcgagccagcag
tcgttcgagcgcgccgaggtcgagcgggcgtatctcgcgggcgagctcgacctcctgtat
gtcgcccccgagcggctcaataccgagccgacgctgcgcctcctcgaacgcgggcgcatc
gcgctcttcgcgatcgacgaggcgcactgcgtgtcgcagtgggggcacgacttccggccc
gactacctcgcgctctcgggcctcgccgagcgctggcccgacgtgccgcgcatcgcgctc
acggcgacggcgaccgaggcgacccacaaagagatcaccgagcggctctcgctcgaacgg
gctgagcacttcgtcgcgagcttcgaccggccgaacatccagtaccgcatcgcgccgaag
atcgaggtgcgcaagcagttgctcgacttcgtgaagagcgaggggcgcgacgccgacggc
aacgcggtcgcgggcatcgtctacgcgctgtcgcgcgcgagcaccgagaagctcgccgac
tacctccgccagcacggcgtcgacgcgatgccgtaccacgcgggcctcgacgcgggcgtg
cggcggcgcacgcaagagcggttcctgcgcgaagacggcgtggtggtcgtcgcgacgatc
gcgttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccacgtcgacctgccg
aagtcggtcgaggggtactaccaagagacggggcgtgccggccgcgacgggcagccggcg
acggcgtggctcgcctacggcctgcaagacgtcgtgcagcagcgccgcatgatcgacgag
agcccgggcgacctcgcgttcaagcggcggctcaccgcgcacctcgacgccatgctcgcg
ctgtgcgagacggtctcgtgccgccgccagaacctcctcgcctacttcgggcagcagagc
gcgccgtgcggcaactgcgacacgtgcctcgagccgcccgcctcatgggacggcacggtc
gcgagccagaagctcctgtcgacgatcgtgcgcctccagcgcgagcgcggtcagcggtac
ggcgcggggcacctcgtcgacatcctgcgcggcaagcggacgccgcgcgtcgagcagtac
gggcacgactcgctcgcgacgttcgggatcggcgacgacctctccgacccgcagtggcgg
ggcgtcgtacggcagctgctcgcgcagggcctgctgcagtcggtcggcgagtacggcgtg
ctcgcgctcaccgaggcatccggtgccgtcctcgcgggcgagcacacggtcgcgttccgc
accgagcccgaccgacccgtgcgcggctcgtcgcgtcgcgcggcggcacccgccgcagcc
gacctcgagcacgcgcaggccgagctcttcgaggcgctccgcgcgtggcgcgcgggcgag
gcgaaagagcagggcgtgcccgcctacatcgtcttcggcgacgcgaccctgcgggcggtc
gcgacggcgaagcccgcgagcctcgccgacctcgacgccatcacgggcatcggggcgaag
aagcgcgaggcgtacggcgaggcagtgctgcgggtcgtcgccgcgcactga
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