Agromyces protaetiae: ET445_12755
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Entry
ET445_12755 CDS
T05835
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
agf
Agromyces protaetiae
Pathway
agf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ET445_12755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agf03021
]
ET445_12755
Transcription machinery [BR:
agf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ET445_12755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QAY74078
UniProt:
A0A4P6FU45
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All DBs
Position
complement(2741008..2742435)
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AA seq
475 aa
AA seq
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MRGRKRMATKSATAAEAEAPKAAPAKRASTSAKSTTTAKTAAKPAAKTAAAAKPAAKTAA
AKSTSASKTAPKTASKTPRTATAKAATRSKAKPKTDDELEDDAEVDPEELEDVAVETVEV
AEVVADADEADADDEEDAAPIPTEPHPTGALVLRAADDEDEVPVYSSAITGATADPVKDY
LKQIGKVALLNAAEEVELAMRIEAGLFAEEKLSHMSEPEKRTQLGRELQWVAKDGQRAKS
HLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQ
AITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELSRELDMTPEKVIEV
QKYGREPISLHTPLGEDGDSEFGDLIEDTEAVVPADAVGFTMLQKQLESLLDSLSEREAG
VIRMRFGLGDGMPKTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQSLRDYLE
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcgaaaacgtatggcaaccaagtccgcgaccgccgccgaggctgaggccccg
aaggctgctccggcgaagcgcgcgtcgacgtcggcgaagtcgacgacgaccgcgaagacg
gcggcgaagcccgccgcgaagactgctgcggctgcgaagccggcagcgaagaccgctgcg
gcgaagtcgacctcggcttccaagaccgcacccaagacggcctcgaagacgccccgcacg
gcgaccgccaaggcggcgacgcgctcgaaggcgaagccgaagaccgacgacgagctcgag
gacgacgccgaggtcgaccccgaagagctcgaagacgtcgcggtcgagaccgtcgaggtc
gcggaggtcgtggccgatgcagacgaagccgacgccgacgacgaggaggacgcggcgccc
attccgacggagccgcacccgaccggtgcgctcgtactccgcgccgccgacgacgaagac
gaggtcccggtctactcgagcgccatcacgggcgccacggccgaccccgtcaaggactac
ctcaagcagatcggcaaggtcgcgctcctgaacgcggccgaagaggtcgagctcgcgatg
cgcatcgaggcgggtctgttcgccgaggagaagctctcgcacatgagcgagcccgagaag
cgcacgcaactcggtcgcgagctgcagtgggtcgcgaaagacggtcagcgtgcgaagagc
cacctgctcggcgcgaacctgcgcctcgtggtctcgctcgccaagcgctacacgggtcgc
ggcatgcagttcctcgacctcatccaggagggcaacctgggcctcatccgtgcggtcgag
aagttcgactacacgaagggcttcaagttctcgacctacgcgacgtggtggatccgccag
gcgatcacgcgtgccatggccgaccaggcccgcacgatccgcatccccgtgcacatggtc
gaggtcatcaacaagctcgcccgcgtccagcgtcagatgctgcaagacctcgggcgcgaa
cccacccccgaagagctctcgcgcgaactcgacatgacccccgagaaggtcatcgaggtg
cagaagtacggccgcgagccgatctcgctgcacacgcccctcggtgaagacggcgacagc
gagttcggcgacctcatcgaagacaccgaggcggtcgtcccggccgacgccgtgggcttc
acgatgctgcagaagcagctcgagtcgctcctcgactcgctctccgagcgcgaggcgggc
gtcatccgcatgcgcttcggcctcggcgacggcatgccgaagacgctcgaccagatcggc
gacaccttcggcgtcacgcgcgagcgcatccgacagatcgagtcgaagacgatggcgaag
ctccgccacccgtcgcgctcgcagtcgctccgcgactacctcgagtag
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