Agromyces protaetiae: ET445_14475
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Entry
ET445_14475 CDS
T05835
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agf
Agromyces protaetiae
Pathway
agf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET445_14475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agf03019
]
ET445_14475
03016 Transfer RNA biogenesis [BR:
agf03016
]
ET445_14475
Enzymes [BR:
agf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ET445_14475
Messenger RNA biogenesis [BR:
agf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ET445_14475
Transfer RNA biogenesis [BR:
agf03016
]
Prokaryotic type
tRNA degradation factors
ET445_14475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
Asparaginase_C
KH_5
Motif
Other DBs
NCBI-ProteinID:
QAY74353
UniProt:
A0A4P6FGT3
LinkDB
All DBs
Position
complement(3102697..3104979)
Genome browser
AA seq
760 aa
AA seq
DB search
MEGPEITFAETVIDNGRFGTRTIRFETGRLAQQAQGSAVAYLDDETMLLSATSVSKQPKD
QFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVEGLRNEVQ
VVVTVLAIEPDELYDVLAINAASLSTQLSGLPFSGPVAGVRVALIDGQWVAFPKYSQLSE
AVFSMVVAGRVVTEEDGSQDVAIMMIEAEATDHAWDLIQAGAVKPNEEVIAQGIEASKPF
ITQLVAAQQQVAATAAKPTAEYPTFPPYQQSTYDVVAGLAYDELKSVYQIAGKVERQDAD
DALKSRVKAAVAAKVEAGELPESAVGEVSAAYKSVTKLVVRSRVLEEGVRIDGRGLRDIR
PLDAEVQVVPRVHGSAIFQRGETQILGITTLNMLKMEQQIDSLSPETKKRYMHNYNFPPY
STGETGRVGSPKRREIGHGALAERALVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLISDTVNGETRYAALTDILGAEDALGDMDFKVAGTSEF
VTAIQLDTKLDGIPASVLAGALTQAKEARTTILQVLNAAIDGPDEMAPTAPRVISVQIPV
DKIGELIGPKGKTINAIQDETGADISIEEDGTVYIGAVDGPSAEAARAQVNAIANPTNPE
VGEQFLGTVVKIATFGAFVSLLPGKDGLLHISEVRKLAGGKRVENVEDVLGVGQKLLVEI
TKIDDRGKLSLAPVLQEEADTNGRETAPVHAEEPAEGAEV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtcctgaaatcacgttcgccgaaaccgtcatcgacaacggtcggttcggcacc
cgcaccatccgcttcgaaaccggccgcctcgcgcagcaggcgcagggctcggccgtcgcc
tacctcgacgacgagacgatgctcctctcggcgacgagcgtctcgaagcagccgaaggat
cagttcgacttcttcccgctgaccatcgacgtcgaagagcgcatgtacgccgccgggcgc
atccccggctcgttcttccgccgcgagggccgcccctcgaccgacgccatcctcacgtgc
cgtctcatcgaccgccccctgcgcccctcgttcgtcgagggcctgcgcaacgaggtccag
gtcgtcgtgacggtcctcgcgatcgagcccgacgagctctacgacgtgctcgccatcaac
gccgcgtcgctctcgacccagctctcgggcctgcccttctcgggccccgtcgccggcgtg
cgcgtcgcgctcatcgacggccagtgggtcgcgttcccgaagtactcgcagctctcggag
gccgtgttcagcatggtcgtcgcgggtcgcgtcgtcaccgaggaagacggctcgcaggat
gtcgcgatcatgatgatcgaggccgaggccaccgaccacgcgtgggacctcatccaggcc
ggcgcggtcaagccgaacgaagaggtcatcgcgcagggcatcgaggcgtcgaagcccttc
atcacgcagctcgtcgccgctcagcagcaggtcgccgccaccgcggcgaagccgaccgcc
gagtacccgacgttcccgccgtaccagcagtcgacgtacgacgtcgtcgcgggcctcgcc
tacgacgagctcaagagcgtctaccagatcgccggcaaggtcgagcgccaggacgccgac
gacgcgctcaagtcgcgcgtcaaggccgccgtcgccgccaaggtcgaggcgggcgagctg
cccgagtcggcggtcggcgaggtctcggccgcgtacaagtcggtcacgaagctcgtcgtc
cgttcgcgcgtcctcgaagagggcgtccgcatcgacggccgcggcctccgcgacatccgt
ccgctcgacgccgaggtgcaggtcgtgccccgcgtccacggctcggccatcttccagcgc
ggcgagacgcagatcctcggcatcacgacgctcaacatgctcaagatggagcagcagatc
gactcgctctcgcccgagacgaagaaacgctacatgcacaactacaacttcccgccgtac
tcgacgggtgagacgggtcgtgtgggttcgccgaagcgtcgcgagatcggccacggcgcg
ctcgccgagcgtgcgctcgtgcccgtgctgcccacgcgcgaggagttcccgtacgccatc
cgccaggtctccgaggcgctcggctcgaacggctcgacctcgatgggctcggtctgcgcg
tcgacgctgtcgctcctgaacgcgggtgtgccgctgcgcgctcccgtcgcgggcatcgcg
atgggcctcatctccgacaccgtgaacggcgagacccgctacgcggcgctcaccgacatc
ctcggcgccgaagacgcgctcggcgacatggacttcaaggtcgccggcacgtcggagttc
gtcacggcgatccagctcgacacgaagctcgacggcatccccgcctcggtgctcgcgggc
gcgctgacccaggcgaaggaggctcgcacgacgatcctccaggtcctgaacgccgcgatc
gacggccccgacgagatggccccgaccgcgcctcgcgtgatctcggtgcagatccccgtc
gacaagatcggcgagctgatcggcccgaagggcaagacgatcaacgcgatccaggacgag
accggcgccgacatctcgatcgaagaagacggcaccgtgtacatcggcgccgtcgacggc
ccgtcggccgaggccgctcgtgcccaggtcaacgcgatcgcgaacccgacgaaccccgag
gtcggcgagcagttcctcggcacggtcgtgaagatcgcgacgttcggcgcgttcgtctcg
ctgcttcccggcaaggacggcctgctgcacatctccgaggtgcgcaagctcgccggcggc
aagcgcgtcgagaacgtcgaagacgtgctcggcgtcggccagaagctcctcgtcgagatc
acgaagatcgacgaccgcggcaagctctcgctcgcgccggtcctccaggaagaggccgac
acgaacggtcgcgagaccgcgccggtgcacgccgaggagcccgcagagggcgccgaggtc
tga
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