Agrococcus sp. SGAir0287: C1N71_05455
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Entry
C1N71_05455 CDS
T05973
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1N71_05455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agg03400
]
C1N71_05455
Enzymes [BR:
agg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C1N71_05455
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C1N71_05455
DNA repair and recombination proteins [BR:
agg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1N71_05455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QCR18961
UniProt:
A0A4P8R3X8
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All DBs
Position
1156121..1156981
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRLGLAPAVAGATIVGVEVLDDRSVARHDAGARDFEATLLGRTMAMPQRRG
KFLWVPLDDERALSIHLGMSGQVLLREPGAALERHARVRLQLEHPLHGAVAVHFADQRIF
GSMSVRPLVDGVPDHATHIARDPLDPDFDADAVVARLRRRRQGVKAAILDQQLVSGIGNI
YADEALWRARLHYLTPAERLSRARGRDLLAEVQGVLERALTEGGTSFDAQYVNVNGESGY
FSRSLQAYGQAGRPCARCGTPIVRESWSNRSSYRCPRCQRRPRGLA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgcccgaggtcgaggtcgtgcgcctcggcctcgcccccgcggtcgccggt
gcgacgatcgtcggcgtcgaggtgctcgacgaccgctcggtcgctcgccacgacgccggg
gcgcgcgacttcgaggcgacgctgctggggcgcacgatggcgatgccgcagcgacgcggc
aagttcctctgggtgccgctcgacgacgagcgcgccctctcgatccacctgggcatgtcc
gggcaggtcctgctgcgcgagccgggtgccgcgctcgagcggcacgcgcgcgtgcgcctg
cagctcgagcatccgctgcacggcgccgtcgcggtgcacttcgccgaccagcgcatcttc
ggctcgatgtcggtgcggccgctcgtcgacggcgtgcccgaccacgcgacgcacatcgcg
cgcgacccgctcgatcccgacttcgacgcggatgcggtcgtcgcgcgcctgcgccgacgc
aggcagggcgtgaaggcggcgatcctcgatcagcagctcgtctcgggcatcggcaacatc
tacgccgacgaggcgctgtggcgcgcccggctgcactacctcacgccggccgagcgcctc
tctcgcgcgcgcggccgcgacctgctcgccgaggtgcagggcgtgctcgagcgcgcgctc
accgagggcggcacgtcgttcgacgcgcagtacgtcaacgtcaacggagagtcgggctac
ttctcccgcagcctgcaggcctacgggcaggcgggcaggccctgcgcccgctgcggcacg
ccgatcgtgcgcgagtcgtggtcgaaccggtcgtcgtaccggtgcccgcgctgccagcgg
cgaccgcgcgggctcgcctga
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