Agrococcus sp. SGAir0287: C1N71_05885
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Entry
C1N71_05885 CDS
T05973
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C1N71_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agg03019
]
C1N71_05885
03009 Ribosome biogenesis [BR:
agg03009
]
C1N71_05885
Messenger RNA biogenesis [BR:
agg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C1N71_05885
Ribosome biogenesis [BR:
agg03009
]
Eukaryotic type
Pre-60S particles
RNases
C1N71_05885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCR19029
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All DBs
Position
complement(1246114..1246752)
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AA seq
212 aa
AA seq
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MPAADRIVWIDCEMTGLDPSIDELVEVAVLVTDFELQVIDPGIELVIRASDAALEHMDDF
VRTMHATSGLDRLIPGGLPLEEAETQVLEYIRRFVPLERSAPLGGNTIGTDRMFLARYMP
RVDQHLHYRSIDVSSIKELSRRWYPRAYFQAPEKAGGHRALADILESVRELQYYRKAVFT
QEDVTSDAARRASEEVVASFADALSSQGRDVS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccgctgaccgcatcgtctggatcgactgcgagatgacgggcctcgacccctcg
atcgacgagctcgtcgaggtcgcggtcctcgtcaccgacttcgagctgcaggtgatcgac
cccggcatcgagctcgtcatcagggcgtcggatgctgcgctcgagcacatggacgacttc
gtgcgcaccatgcacgccacgagcggcctcgatcgcctcatcccgggcggcctgccgctg
gaggaggccgagacgcaggtgctcgagtacatccggcgcttcgtgccgctcgagcgctcc
gcgccgctcggtggcaacaccatcggcaccgaccgcatgttcctcgcgcgctacatgccg
cgcgtcgaccagcatctccactaccgctcgatcgacgtgtcgagcatcaaggagctctcg
cgccgctggtacccgcgcgcctacttccaggcgcccgagaaggccggcggtcaccgcgcg
ctcgccgacatcctcgagtccgtgcgcgagctccagtactaccgcaaggccgtcttcacg
caggaggacgtgacgagcgacgccgccaggcgggcctcggaggaggtcgtcgcatccttc
gccgacgcgctgtcgtcgcagggccgggatgtgtcgtag
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