Agrococcus sp. SGAir0287: C1N71_07010
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Entry
C1N71_07010 CDS
T05973
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
agg
Agrococcus sp. SGAir0287
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agg03019
]
C1N71_07010
Enzymes [BR:
agg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C1N71_07010
Messenger RNA biogenesis [BR:
agg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C1N71_07010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QCR19212
LinkDB
All DBs
Position
complement(1456577..1459012)
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AA seq
811 aa
AA seq
DB search
MTAVATEAFGAALPFGLDPFQREACELVEQGRSVLVAAPTGAGKTIVAEFAIHLTMAAPT
GRVFYTTPMKALSNQKFRELQAVYGDDAGLLTGDTSIRGDARVVVMTTEVLRNMLYEGRD
LADLEHVVMDEVHYLADRFRGAVWEEVIIHLPRHVRMVSLSATVSNAEEFGAWLEAVRGD
TSLVVSEHRPVPLDGHVLVRGSLVDLFDSRGDAEQHRPSRELVERTRGSDGSAAHGHRDR
GGHNRHVRRGQQGRKGQRRGSVARDAYTWRGDSRPARVDRAALIDLLDEASMLPAICFIF
SRKGCDAAVEQVLRGGISLTTAEERGEIRALVEERTRRLDESDLAVLGFWEWLDGLERGV
AAHHAGLLPVFKEIVEELFQRRLVRVVFATETLALGINMPARTVVLEQLEKFNGEARVRI
TPGEYTQLTGRAGRRGIDTEGHAVIVWTGEQTPQEIANLASRRSYPLQSSFRPTYNMAVN
LIDRFGVDRTRGVLETSFAQFQADRSVVQLARRVVDQRASLEGYAEAMTCHLGDFSEYAA
LRRESSDLEREGQRAGMSHAERDALQQRLRDLRALLRSHPCHACPERESHARWGERYWRL
AREVEQADRQISRRTGQVAERFDRICDVLRTLQYVVPGEDGDEVTEAGERLRRIYGERDL
LVAESLRRGLWTHLDAADLAALVCALVFEPRRGEQASERHLPGGPFREALAATTTLWAEL
DDLERAKRLPGSEPPQTGLSVAMHRWARGAHLDVVLRDTDLAAGDFVRWVRQTVDVLEQL
QDVGTARIRRTARDAVDRIRRGVVDLGQEAA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccgtcgcgaccgaggccttcggcgcggcgctgccgttcggcctcgaccccttc
cagcgggaggcgtgcgagctcgtcgagcaggggcgcagcgtgctcgtcgccgcaccgacg
ggggccggcaagacgatcgtcgccgagttcgccatccacctgacgatggcggcgcccacc
ggccgcgtcttctacacgacgcccatgaaggcgctgtcgaaccagaagttccgcgagctg
caggccgtctacggcgacgacgccggactgctgacgggggacacgtcgatccgcggcgac
gcgcgcgtcgtcgtcatgacgaccgaggtgctgcgcaacatgctctacgagggtcgcgac
ctcgccgacctcgagcacgtcgtcatggacgaggtgcactacctcgccgaccgcttccgc
ggcgccgtgtgggaggaggtcatcatccacctcccgcggcacgtgcgcatggtgtcgctg
tcggccacggtctccaacgccgaggagttcggcgcgtggctcgaggccgtgcgcggcgac
acgagcctcgtcgtgagcgagcaccgtcccgtgccgctcgacggtcacgtgctcgtgcgc
ggctcgctcgtcgacctcttcgactcccgcggcgacgccgagcagcatcggcccagccgc
gagctcgtcgagcgcacgcgcggcagcgacggctccgccgcgcacggccaccgcgatcgc
ggcggccacaatcggcacgtccggcgcggccagcagggccgcaaggggcagcgccgcgga
tcggtcgcgcgcgacgcgtacacgtggcgcggcgactcgcggcccgcgcgcgtcgatcgt
gccgcgctcatcgacctcctcgacgaggcatcgatgctgcccgcgatctgcttcatcttc
tcccgcaagggctgcgatgcggcggtcgagcaggtgctgcgcggcggcatctcgctcacg
acggccgaggagcgcggcgagatccgcgccctcgtcgaggagcgcacgcgcaggctcgac
gagtcggacctcgccgtgctcggcttctgggagtggctcgacgggctcgagcggggcgtc
gccgcccaccacgcagggctcctgcccgtgttcaaggagatcgtcgaggagctcttccag
cgccggctcgtgcgcgtcgtcttcgcgacggagacgctcgcgctcggcatcaacatgccc
gcgcggaccgtcgtgctcgagcagctcgagaagttcaacggcgaggcgcgcgtgcgcatc
acgcccggcgagtacacgcagctcacgggccgcgccggtcgccgcggcatcgacaccgag
ggccacgccgtgatcgtctggaccggcgagcagacgccgcaggagatcgcgaacctcgcg
tcgcgtcgctcgtacccgctgcagtcgagcttccgacccacgtacaacatggccgtgaac
ctcatcgaccgcttcggcgtcgaccgcacgcgcggcgtgctcgagacctcgttcgcgcag
ttccaggccgaccgctccgtcgtgcagctcgcgcggagggtcgtcgaccagcgcgcgagc
ctcgaggggtacgcagaggccatgacgtgccacctgggcgacttctccgagtacgcggcg
ctgcgccgcgagtcgagcgacctcgagcgcgaggggcagcgcgccggcatgagccacgcc
gagcgcgacgcgctgcagcagcggctgcgcgacctgcgcgcgctcctgcggtcgcatccg
tgccatgcctgccccgagcgcgagagccacgcccgctggggcgagcggtactggcggctc
gcgcgggaggtcgagcaggccgaccggcagatctcgcgccgcacggggcaggtcgccgag
cgcttcgatcgcatctgcgacgtgctgcgcacgctgcagtacgtcgtgcccggcgaggac
ggcgacgaggtgaccgaggcgggggagcggctgcggcgcatctacggcgagcgcgacctg
ctcgtcgccgagtcgctgcgccgcggcctgtggacccatctcgacgccgcggacctcgct
gccctcgtgtgcgcgctcgtcttcgagccgcggcgcggcgagcaggcgtccgagcggcat
ctgcccggcggacccttccgcgaggcgctcgccgcgaccacgaccctgtgggcggagctc
gacgacctcgagcgcgccaagcgcctgccgggctcggagccgccgcagacgggcctgtcg
gtggcgatgcaccggtgggcgcgcggcgcgcacctcgacgtcgtgctccgcgacaccgac
ctcgccgccggcgacttcgtgcgctgggtgcggcagacggtcgacgtgctcgagcagctg
caggacgtcggcaccgcgcgcatccgccgcacggcgcgggatgcggtcgaccgcatccgg
cgcggcgtcgtcgacctcgggcaggaggcggcatga
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