Agrococcus sp. SGAir0287: C1N71_07130
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Entry
C1N71_07130 CDS
T05973
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03030
DNA replication
agg03430
Mismatch repair
agg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N71_07130
03430 Mismatch repair
C1N71_07130
03440 Homologous recombination
C1N71_07130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agg03032
]
C1N71_07130
03400 DNA repair and recombination proteins [BR:
agg03400
]
C1N71_07130
Enzymes [BR:
agg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N71_07130
DNA replication proteins [BR:
agg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N71_07130
DNA repair and recombination proteins [BR:
agg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N71_07130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCR20724
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All DBs
Position
1478581..1479255
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AA seq
224 aa
AA seq
DB search
MAVFDLETTGVDTSTARIVTAFLGVLDERGELVEQHAWLADPGIEIPQGAAAIHGITTER
ARAEGQPARDVVAAIVAELSNLLRAGTPVVAYNAAYDLTVLHHEALRHGIAPVESPAPVI
DPLVLDKQVDRYRKGKRTLGVTCAHYGIELDGWHEASADAIAAGRLAQAMHELFPQLQVP
ADELHASTIDWATQQAESFARYMQRRDPAFAADRGWPIREPRRA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ctggcggtcttcgacctcgagacgacgggcgtcgacacctccacggcccgcatcgtcacc
gcgttcctcggcgtgctcgacgagcgcggcgagctcgtcgagcagcacgcatggctcgcg
gatcccggcatcgagatcccccagggcgcagccgccatccacggcatcaccaccgagcgc
gcgcgtgccgagggacagcccgcgcgcgacgtcgtcgccgcgatcgtcgcggagctgtcg
aacctgctgcgcgcaggcacgcccgtcgtcgcctacaacgccgcctacgacctcacggtg
ctgcaccacgaggcgctgcggcacggcatcgcgcccgtcgagtcgcccgctcccgtgatc
gacccgctcgtgctcgacaagcaggtcgaccgctaccgcaagggcaagcgaaccctcggc
gtcacgtgcgcgcactacggcatcgagctcgacggctggcacgaggcctccgccgacgcc
atcgccgccggtcgcctcgcgcaggcgatgcacgagctgttcccccagctgcaggtgcct
gccgacgagctgcacgcctccacgatcgactgggcgacgcagcaggccgagtcgttcgcg
cgctacatgcagcgccgcgaccccgcgttcgcggccgaccgcggctggcccatccgcgag
ccgcgacgggcgtga
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