Agrococcus sp. SGAir0287: C1N71_08485
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Entry
C1N71_08485 CDS
T05973
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03030
DNA replication
agg03430
Mismatch repair
agg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N71_08485 (holA)
03430 Mismatch repair
C1N71_08485 (holA)
03440 Homologous recombination
C1N71_08485 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agg03032
]
C1N71_08485 (holA)
03400 DNA repair and recombination proteins [BR:
agg03400
]
C1N71_08485 (holA)
Enzymes [BR:
agg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N71_08485 (holA)
DNA replication proteins [BR:
agg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N71_08485 (holA)
DNA repair and recombination proteins [BR:
agg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N71_08485 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QCR19460
LinkDB
All DBs
Position
complement(1771841..1772806)
Genome browser
AA seq
321 aa
AA seq
DB search
MPRQMTWDAAAPAPVVLVSGKEDYLAQRAMQRIRAILAHEDPSLEISDIEADQYVPGTLI
QLASPSLFGEPRLIRVTRVQATTDAFLEEALAYVAEPVPDTTLVLRHDGSSVRGKRLLDA
VRKAHVEVPCLPITKDADRIAFARAEIQAEGRTVTQGALKALAEAFSKDLGELAAACNQL
VQDTQGEISDETVREYYAGHVETTAFDVADAVVAGDAAGALVRLRQAVASGADPVPVVAA
FAMRFRQLAKVSTNHGPEGQAAKALGMAPWQVRNARRDLQRYSDDRLGRAIALIAETDHA
VKGAARSPMHALERMVRVLAS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcagatgacgtgggacgccgccgcgcccgcacccgtcgtgctcgtctccggc
aaggaggactacctcgcgcagcgcgcgatgcagcgcatccgcgccatcctcgcccacgag
gatccgtcgctcgagatctccgacatcgaggcggaccagtacgtgccgggcacgctcatc
cagctcgcgagcccctcgctgttcggcgagccccgcctcatccgcgtgacgcgcgtgcag
gcgacgaccgacgccttcctcgaggaggcgctcgcgtacgtcgccgagcccgtgcccgac
acgacgctcgtgctgcgccacgacggctcgagcgtccgaggcaagcggctgctcgacgcc
gtgcggaaggcgcacgtcgaggtgccgtgcctgccgatcacgaaggacgccgatcgcatc
gccttcgcgcgcgccgagatccaggcggagggtcgcacggtgacgcagggcgcgctcaag
gcgctcgcggaggcgttctcgaaggacctcggcgagctcgccgccgcatgcaaccagctc
gtgcaggacacgcagggcgagatcagcgacgagaccgtgcgcgagtactacgccggccac
gtcgagacgacggcgttcgacgtcgccgacgccgtcgtggccggcgacgccgccggcgcg
ctcgtgcggcttcgccaggccgtcgcgtcgggcgccgaccccgttcccgtcgtcgcagcc
ttcgcgatgcgcttccggcagctcgcgaaggtctccacgaaccacggcccggagggccag
gcggcgaaggcgctgggcatggcgccgtggcaggtgcgcaacgcgcgccgcgacctgcag
cgctactccgacgaccggctcggccgtgcgatcgcgctcatcgccgagacggaccacgcc
gtgaagggcgcggcgcgcagtcccatgcacgccctcgagcgcatggtgcgcgtcctcgcg
tcctga
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