Agrococcus sp. SGAir0287: C1N71_09975
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Entry
C1N71_09975 CDS
T05973
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N71_09975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agg03021
]
C1N71_09975
03019 Messenger RNA biogenesis [BR:
agg03019
]
C1N71_09975
Transcription machinery [BR:
agg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C1N71_09975
Messenger RNA biogenesis [BR:
agg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C1N71_09975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
ATPase_2
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR19709
UniProt:
A0A4P8RBP0
LinkDB
All DBs
Position
complement(2096195..2098165)
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AA seq
656 aa
AA seq
DB search
MTNETIDVDAAAAEGAAPEPQADAAPAAEAPTAPKARRSRRAQSAAAAPEAATLDLPAAE
TPAAETPAPEADAAQAPAASEDAPVEAPKRKRATRKKKDEPKAEEATEAPAEEATAPAEA
EAPQAAASEDAAQPEGEQQADAGAQAEGDQGAEAAQQDKGEQPADDGEQRPSRRRRGRGK
GGANADQQDKGEQTAAGRQQQQTQQAGDDDEAAEGGRRGRGRGNGNGNGNGTGTGEGRGQ
RGGEAELESRRSRTRDRRRGQGRGDDLEPEILEDDVLLPVAGILDVLENYAFVRTTGYLP
GSSDVYVSLGQVRKHHLRKGDAVVGAIKQPREGEHQGAQGRQKFNALVRVDSINGQPVEE
AANRPEFAKLTPLYAQDRLRLETVPGKLSTRVIDLVAPIGKGQRGLIVSPPKAGKTLVMQ
AIANAIAENDPDVHLMIVLVDERPEEVTDFQRTVKGEVIASTFDRPAEDHTTLAELAIER
AKRLVELGKDVVVLLDGITRLGRAYNLSTPASGRILSGGVDSSALYPPKRFFGAARNIEH
GGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRHLADKRIFPAVDVNASGTRREE
MLLGTEETKVMWKLRRALAGLEPQQATELVLKNLKDTQSNVEFLMKVSKSTPGEQA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgagaccatcgacgtcgacgctgccgccgcagagggtgcagcgcccgagccg
caggccgacgccgcccccgccgccgaggcgcccaccgcccccaaggcgcgacgctcgcgc
cgtgcgcagagcgcggcagcggcgccggaggccgcgacgctcgacctgccggccgccgag
acgccggccgccgagacgccggcacccgaggcggacgctgcccaggcgcctgcggcgagc
gaggacgctcccgtcgaggcgccgaagcgcaagcgcgcgacgcgcaagaagaaggacgag
cccaaggccgaggaggctaccgaggccccggccgaggaggcgaccgcgcccgccgaggcc
gaggcgccgcaggccgcggcctccgaggatgccgcgcagccggagggcgagcagcaggcc
gacgccggagcgcaggccgagggcgaccagggtgccgaggccgcgcagcaggacaagggc
gagcagcccgccgacgatggcgagcagcgcccgagccgccgccgtcgcggccgcggcaag
ggcggcgccaacgccgaccagcaggacaagggcgagcagaccgcggccgggcgtcagcag
cagcagacgcagcaggccggcgacgacgacgaggcggccgagggcggccgtcgcggtcgc
ggtcgcggcaacggcaacgggaacggcaatggcaccggcaccggcgagggtcgcggccag
cgcggcggcgaggccgagctcgagtcgcggcgcagccgcacgcgcgatcgtcgtcgtggc
cagggtcgcggcgacgacctcgagcccgagatcctcgaggacgacgtcctgctgcccgtc
gcgggcatcctcgacgtgctcgagaactacgcgttcgtgcgcaccacgggctacctcccg
ggctcgagcgacgtctacgtctcgctcggccaggtccgcaagcaccacctgcgcaagggc
gacgccgtcgtcggcgccatcaagcagcctcgcgagggcgagcaccagggtgcgcagggg
cggcagaagttcaacgcgctcgtgcgcgtcgactccatcaacgggcagcccgtcgaggag
gccgcgaaccgacccgagttcgcgaagctcacgccgctctatgcgcaggaccgcctgcgc
ctcgagaccgtgcccggcaagctgtcgacgcgcgtcatcgacctcgtcgcgccgatcggc
aaggggcagcgcggcctcatcgtctcgccgccgaaggccggcaagacgctcgtgatgcag
gcgatcgcgaacgccatcgccgagaacgaccccgacgtccacctcatgatcgtgctcgtc
gacgagcggcccgaggaggtcaccgacttccagcgcaccgtcaagggcgaggtcatcgcg
tcgacgttcgaccgtcccgccgaggaccacacgacgctcgcggagctcgccatcgagcgc
gccaagcgcctcgtggagctcggcaaggacgtcgtggtgctgctggacggcatcacgcgc
ctcggccgcgcctacaacctctccacgcccgcctcgggccgcatcctctcgggcggcgtc
gactcgagcgcgctctacccgccgaagcgcttcttcggcgcggcgcgcaacatcgagcac
ggcggctcgctcacgatcctcgccacggcgctcgtcgagaccggatcgaagatggacgag
gtgatcttcgaggagttcaagggcaccggcaacatggagctgcgcctgtcgcggcacctc
gccgacaagcgcatcttcccggcggtcgacgtcaacgcgtccggcacccgccgcgaggag
atgctgctcggcaccgaggagaccaaggtcatgtggaagctgcgtcgcgccctcgccggg
ctcgagccgcagcaggccaccgagctcgtgctcaagaacctcaaggacacccagtcgaac
gtcgagttcctcatgaaggtctcgaagtcgacgccgggcgagcaggcctga
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