Agrococcus sp. SGAir0287: C1N71_10990
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Entry
C1N71_10990 CDS
T05973
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
agg
Agrococcus sp. SGAir0287
Pathway
agg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C1N71_10990
09124 Replication and repair
03420 Nucleotide excision repair
C1N71_10990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agg03021
]
C1N71_10990
03400 DNA repair and recombination proteins [BR:
agg03400
]
C1N71_10990
Enzymes [BR:
agg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N71_10990
Transcription machinery [BR:
agg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C1N71_10990
DNA repair and recombination proteins [BR:
agg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C1N71_10990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCR19890
UniProt:
A0A4P8RAT2
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All DBs
Position
2306595..2308223
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AA seq
542 aa
AA seq
DB search
MNDGPLIVQSDRTVLLEVAHPAAADARHELAVFAELERAPEHIHTYRITQLGLWNARAAG
HTADEMLGTLERHARFPVPSAVALDMRETVSRYGRLTIDRDDEGLRLRSDDRPVLAEVRR
SKRIAPLLAEDVEGGIRIVDWARGQLKQELVKIGWPAEDLAGFTPGTPFDIDLVEDGWVL
RPYQQDAVRHFADAGSGVVVLPCGAGKTIVGAAAMAATDTTTLILVTNTVSARQWRAELL
ARTTLTEDDIGEYSGQSKEIRPVTIATYQILTAKRAGELAHLRVLDALDWGLVVYDEVHL
LPAPVFKLTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGFISPAA
CFEVRIDLTESERLEYAASADRERYRIAASSPAKVTVAKRILRRHEGEQTLVIGQYLDQL
DELAEALDAPLVTGQTPVDERERLFQGFREGTIGTLVVSKVANFSVDLPDASVAIQVSGS
FGSRQEEAQRLGRLLRPKSGGRSASFYTLVARDTIDQDFALGRQRFLAEQGYSYEILDAA
DL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacggcccgctgatcgtgcagagcgaccgcaccgtgctgctcgaggtggcgcac
cctgcggccgctgacgcccgccatgagctcgcggtcttcgccgagctcgagcgagcgccc
gagcacatccacacgtaccgcatcacgcagctcgggctgtggaacgcgcgcgcggccggc
cacacggccgacgagatgctcggcacgctcgagcggcacgcgcgcttccccgtgccgtcg
gccgtcgcgctcgacatgcgcgagacggtctcccgctacggtcggctgacgatcgaccgg
gacgacgaggggctgcggctgcgcagcgacgaccgccccgtgctcgccgaggtgcggcga
tcgaagcgcatcgccccgctgctcgcggaggacgtggagggcggcatccgcatcgtcgac
tgggcgcggggccagctgaagcaggagctcgtcaagatcggctggccggccgaggacctc
gccggcttcacgcccgggacccccttcgacatcgacctcgtcgaggacggctgggtgctg
cggccctaccagcaggacgccgtgcggcacttcgcggatgccggctccggcgtcgtggtg
ctgccctgcggcgccggcaagacgatcgtgggcgccgcggcgatggccgcgaccgacacg
acgaccctcatcctcgtcacgaacaccgtctccgcgcgccagtggcgtgccgagctgctc
gcgcgcacgacgctcaccgaggacgacatcggcgagtactcgggccagtccaaggagatc
cggcccgtcacgatcgcgacgtaccagatcctcacggcgaagcgcgccggcgagctcgcg
catctgcgcgtgctcgacgccctcgactgggggctcgtcgtctacgacgaggtgcacctg
ctgcccgccccggtgttcaagctgacggccgacctgcaggccaggcgacgcctcgggctc
accgcgacgctcgtgcgcgaggacggccgcgagtccgacgtgttcagcctcatcggcccc
aagcgcttcgacgcaccgtggaaggagatcgaggcgcaggggttcatctcccccgccgcg
tgcttcgaggtgcgcatcgacctcaccgagtcggagcggctcgagtacgccgcgagcgcc
gaccgcgagcgctaccgcatcgcggcgtcgagccccgcgaaggtcacggtcgcgaagcgc
atcctgcgtcgccacgagggcgagcagacgctcgtcatcggccagtacctcgatcagctc
gacgagctcgccgaggcgctcgacgcgccgctcgtcaccggccagacccccgtcgacgag
cgcgagcgcctcttccagggcttccgcgagggcacgatcggcacgctcgtcgtctcgaag
gtcgcgaacttctcggtcgacctgccagatgcgtccgtcgccatccaggtgtcgggatcc
ttcggctcgcggcaggaggaggcgcagcggctcggccggctcctgcggccgaagtcgggc
gggcgcagcgcctcgttctacacgctcgtcgcgcgggacacgatcgaccaggacttcgca
ctcggccgccagcggttcctcgcggagcagggctactcgtacgagatcctcgacgccgcc
gacctgtag
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