KEGG   Agrococcus sp. SGAir0287: C1N71_10990
Entry
C1N71_10990       CDS       T05973                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
agg  Agrococcus sp. SGAir0287
Pathway
agg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:agg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    C1N71_10990
  09124 Replication and repair
   03420 Nucleotide excision repair
    C1N71_10990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agg03021]
    C1N71_10990
   03400 DNA repair and recombination proteins [BR:agg03400]
    C1N71_10990
Enzymes [BR:agg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C1N71_10990
Transcription machinery [BR:agg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     C1N71_10990
DNA repair and recombination proteins [BR:agg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     C1N71_10990
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD AAA_30
Other DBs
NCBI-ProteinID: QCR19890
UniProt: A0A4P8RAT2
LinkDB
Position
2306595..2308223
AA seq 542 aa
MNDGPLIVQSDRTVLLEVAHPAAADARHELAVFAELERAPEHIHTYRITQLGLWNARAAG
HTADEMLGTLERHARFPVPSAVALDMRETVSRYGRLTIDRDDEGLRLRSDDRPVLAEVRR
SKRIAPLLAEDVEGGIRIVDWARGQLKQELVKIGWPAEDLAGFTPGTPFDIDLVEDGWVL
RPYQQDAVRHFADAGSGVVVLPCGAGKTIVGAAAMAATDTTTLILVTNTVSARQWRAELL
ARTTLTEDDIGEYSGQSKEIRPVTIATYQILTAKRAGELAHLRVLDALDWGLVVYDEVHL
LPAPVFKLTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGFISPAA
CFEVRIDLTESERLEYAASADRERYRIAASSPAKVTVAKRILRRHEGEQTLVIGQYLDQL
DELAEALDAPLVTGQTPVDERERLFQGFREGTIGTLVVSKVANFSVDLPDASVAIQVSGS
FGSRQEEAQRLGRLLRPKSGGRSASFYTLVARDTIDQDFALGRQRFLAEQGYSYEILDAA
DL
NT seq 1629 nt   +upstreamnt  +downstreamnt
gtgaacgacggcccgctgatcgtgcagagcgaccgcaccgtgctgctcgaggtggcgcac
cctgcggccgctgacgcccgccatgagctcgcggtcttcgccgagctcgagcgagcgccc
gagcacatccacacgtaccgcatcacgcagctcgggctgtggaacgcgcgcgcggccggc
cacacggccgacgagatgctcggcacgctcgagcggcacgcgcgcttccccgtgccgtcg
gccgtcgcgctcgacatgcgcgagacggtctcccgctacggtcggctgacgatcgaccgg
gacgacgaggggctgcggctgcgcagcgacgaccgccccgtgctcgccgaggtgcggcga
tcgaagcgcatcgccccgctgctcgcggaggacgtggagggcggcatccgcatcgtcgac
tgggcgcggggccagctgaagcaggagctcgtcaagatcggctggccggccgaggacctc
gccggcttcacgcccgggacccccttcgacatcgacctcgtcgaggacggctgggtgctg
cggccctaccagcaggacgccgtgcggcacttcgcggatgccggctccggcgtcgtggtg
ctgccctgcggcgccggcaagacgatcgtgggcgccgcggcgatggccgcgaccgacacg
acgaccctcatcctcgtcacgaacaccgtctccgcgcgccagtggcgtgccgagctgctc
gcgcgcacgacgctcaccgaggacgacatcggcgagtactcgggccagtccaaggagatc
cggcccgtcacgatcgcgacgtaccagatcctcacggcgaagcgcgccggcgagctcgcg
catctgcgcgtgctcgacgccctcgactgggggctcgtcgtctacgacgaggtgcacctg
ctgcccgccccggtgttcaagctgacggccgacctgcaggccaggcgacgcctcgggctc
accgcgacgctcgtgcgcgaggacggccgcgagtccgacgtgttcagcctcatcggcccc
aagcgcttcgacgcaccgtggaaggagatcgaggcgcaggggttcatctcccccgccgcg
tgcttcgaggtgcgcatcgacctcaccgagtcggagcggctcgagtacgccgcgagcgcc
gaccgcgagcgctaccgcatcgcggcgtcgagccccgcgaaggtcacggtcgcgaagcgc
atcctgcgtcgccacgagggcgagcagacgctcgtcatcggccagtacctcgatcagctc
gacgagctcgccgaggcgctcgacgcgccgctcgtcaccggccagacccccgtcgacgag
cgcgagcgcctcttccagggcttccgcgagggcacgatcggcacgctcgtcgtctcgaag
gtcgcgaacttctcggtcgacctgccagatgcgtccgtcgccatccaggtgtcgggatcc
ttcggctcgcggcaggaggaggcgcagcggctcggccggctcctgcggccgaagtcgggc
gggcgcagcgcctcgttctacacgctcgtcgcgcgggacacgatcgaccaggacttcgca
ctcggccgccagcggttcctcgcggagcagggctactcgtacgagatcctcgacgccgcc
gacctgtag

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