| Entry |
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| Symbol |
gyrB
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| Name |
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
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| KO |
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| Organism |
agh Actinomyces graevenitzii
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| Brite |
KEGG Orthology (KO) [BR:agh00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:agh03032]
M3I41_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:agh03400]
M3I41_00025 (gyrB)
Enzymes [BR:agh01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M3I41_00025 (gyrB)
DNA replication proteins [BR:agh03032]
Prokaryotic type
DNA Topoisomerases
M3I41_00025 (gyrB)
DNA repair and recombination proteins [BR:agh03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M3I41_00025 (gyrB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4990..7005
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| AA seq |
671 aa
MAEQDSTVTNDSYGASNITVLEGLEAVRKRPGMYIGSTGERGLHHCVYEVVDNSVDEALA
GYCDHIEVTILPDGGVRVVDNGRGIPVDEHPTEHKPAVEVVLTVLHAGGKFGGGGYSVSG
GLHGVGVSVVNALSSHLSVEVRRDGYVWNIDFADGVPTAPLRRGEATDQTGTTVTFWPNP
EIFETTVFDFETLRRRFQQMAFLNKGLRISLTDERDLSVDGDEIAGSEQDTQEHKHRSVS
YMYSDGLRDYVHFLNKTKKAELIHPEIIDFSAEQSGEHGGMSVEIAMQWTAAYSESVHTY
ANTINTTEGGTHEEGFRTALTTLVNKYAREKGLLKDKEDNLSGEDVREGLTAVISIKLSE
PQFEGQTKTKLGNTEARSFVQQTVYAQLTDWFDAHPADAKAVISKAKQASAARIAARKAR
EATRRKGVLESASMPGKLRDCSSRDASNSEIFIVEGDSAGGSAVGGRDPEHQAILPIRGK
ILNVEKARLDRALSSDTIRSLITAFGTGIGEDFELEKLRYHKIVIMADADVDGSHIATLL
LTLLFRYMRPLIENGHVYIAMPPLYRLKWSNAEHEFAYSDEQRDRLREAGAAKGWRMPKE
NGIQRYKGLGEMNDHELWDTTMDPAHRILKQVTLDEAADADETFAVLMGDDVESRRSFIQ
RNANDVRFLDI |
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| NT seq |
2016 nt +upstreamnt +downstreamnt
gtggctgagcaggatagcactgtgactaacgacagctacggagcttcaaatatcacggtt
ttggaaggccttgaagctgtccgcaagcgtcccggtatgtatatcggttccaccggtgag
cgcggcctgcaccactgcgtatacgaggtagtggataactccgtagatgaggctctagcc
ggttactgtgaccacattgaagtcaccatcctgcccgacggcggtgtgcgcgtggtagac
aacggtcgcggtatcccggtggatgagcaccccactgaacacaagcccgcagttgaggta
gtacttaccgtgctgcacgcaggcggtaagttcggcggtggcggttactccgtttccggt
ggtttgcacggtgtgggtgtgtcggtagttaacgccctgtcctcccacctgtccgttgag
gtgcgccgcgacggttacgtttggaatattgattttgccgacggcgtccccactgctccc
ttgcgtcgcggcgaggccactgaccagacgggcacaaccgtcaccttctggcccaacccc
gaaatttttgaaaccaccgttttcgactttgagacgctgcgtcgtcgtttccagcagatg
gccttcttgaacaagggcctgcgcatctcgctaaccgacgagcgtgacctatccgttgac
ggcgacgaaattgccggcagcgagcaagacacccaggagcacaagcaccgcagcgtgtct
tacatgtactccgacggtctacgcgactacgtgcacttcttgaacaaaaccaagaaggct
gagctgatccaccccgaaatcattgacttctccgctgagcaaagcggcgagcacgggggt
atgagtgtagaaatcgccatgcagtggaccgccgcctactccgagtcggtacacacctac
gccaacaccatcaataccaccgagggtggtactcacgaagaaggcttccgcaccgccctg
accacgctggtcaacaagtatgcgcgcgaaaagggcctgcttaaagacaaggaagataac
ctctccggtgaggacgtacgtgagggcctaacggcagttatctccattaagctctctgag
ccccagtttgagggccagaccaaaaccaaactgggtaacactgaggcccgctcctttgtg
cagcagacggtttacgcccagctaaccgactggtttgacgctcacccggcagacgccaag
gcagttattagcaaggctaagcaggcttctgctgcgcgtattgcggcccgtaaagcccgt
gaagctacccgtcgtaagggtgtgctagaaagcgcctccatgcccggtaagctgcgtgac
tgctcctcgcgcgacgcctctaactctgaaattttcatcgttgagggtgactctgcaggt
ggctctgcggtaggtggtcgcgaccccgagcaccaggcaattttgccaatccgaggcaag
attttgaacgtggaaaaggcccgcctagaccgcgccctgtccagcgacactatccgctcg
ctgatcaccgcctttggtaccggcattggtgaagattttgagcttgaaaagctgcgttac
cacaagatcgtgattatggccgacgccgatgtggacggctcccacatcgccaccttgctg
ttgacgctgctgttccgctacatgcgtccgctgatcgaaaacggtcacgtctacatcgct
atgccgccgctgtaccgcctcaagtggtccaacgccgagcacgaatttgcctacagcgac
gagcaacgcgaccgcctgcgtgaagctggcgccgccaagggctggcgtatgcccaaggaa
aacggcattcagcgctacaagggtctaggtgaaatgaacgaccacgagctgtgggacacc
accatggacccagcccaccgcatcctcaagcaggtcaccttggatgaggctgccgacgct
gacgaaaccttcgcggttttgatgggtgacgacgtcgaatcacgccgtagcttcatccaa
cgcaacgctaacgacgtgcgcttcctggatatctga |
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