Actinomyces graevenitzii: M3I41_00870
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Entry
M3I41_00870 CDS
T08387
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
agh
Actinomyces graevenitzii
Brite
KEGG Orthology (KO) [BR:
agh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agh03019
]
M3I41_00870 (hrpA)
Enzymes [BR:
agh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M3I41_00870 (hrpA)
Messenger RNA biogenesis [BR:
agh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M3I41_00870 (hrpA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_19
AAA_22
WHD_HA2
PhoH
NACHT
nSTAND3
ResIII
nSTAND_NTPase5
SLFN-g3_helicase
SRP54
T2SSE
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
UQF79867
UniProt:
A0A9E7AMC1
LinkDB
All DBs
Position
complement(225085..229599)
Genome browser
AA seq
1504 aa
AA seq
DB search
MNEHFSQPSQPDATNSAAAPRRRPARHQRNHRRRQHKNQAAPRPFTPTQLSQRAASVPTI
TYPAQLPVSARQEEIAAAILANQVVIVAGETGSGKTTQIPKICLDLGRGVNAMIGHTQPR
RIAARSVAERIAQELGTKVSKESIVGYQVRFTDEVSEHTLIKLMTDGILLAEIQNDPLLR
RYDTLIIDEAHERSLNIDFILGYLARLLPQRPDLKVIITSATIDSERFAAHFGVEGRPAP
IIEVSGRTYPVEIRYRPLDGVEPEPDSSQTNSAAASASTDEPRDQVTGILDAVDELMALG
PGDILVFLAGERDIRDTEAALIDHLGPRYAANESSARLPGSVEIIPLYSRLSAAAQHRVF
EKHRLRRIVLATNVAETSLTVPSIRYVIDPGVARISRYSNKTKVQRLPIEPISQASANQR
SGRCGRVADGVAIRLYSQTDYEGREPYTEPEILRTSLASVILQMAALRLGNVADFPFIDP
PDRRAIADGVALLTEIGAISANSKSMHEPRLTAIGHQLARLPIDPRLGRMLLEANKRGCA
SEVMVIVSALSIQDVRERPLDAQEAADAMHRRLADPTSDFLTYLNFWRYLRTQSRDLSGS
AFRRMCRHEYLHYLRIREWRDVYNQLAQLARPLGINAQNIELPTRASIRAASDRLVPGSH
AAGMANADVADAVVALGQSADTPDTDAIHQSLLVGLLSNLGNYDERRREYAGARATHFTI
WPGSGLRRKQYDWVMAAELVETSRLFARTVARIQPQWVEQAAKHLVKVTYGEPYWSTKKG
AAMVHQRVLLYGLTLVADRPVTLASVGTDAARQAAREMFIRSGLVEGGWHARHAFVERNR
ELLEDTAEVERRQRTHGILADDQALFDFYDERLPEKITSAAAFDNWWKHQRQDTPKLLDF
TRELLLPEGDNLDGYPDTWHQGDLTLALTYVFEPGRLDDGVSVQVPIEVLTRLRPEGFDW
LVPGMRPQLCVATIRALPKRVRRQLVPAPDTGTRIWELICQLYPQAAGEASDGVGASGTG
ASSTPDGGADGAAASQPGGVEPIPVSFQQAFTQAAQQLRQVEITDEDWDQAQENLPEHLR
MGFSVLDARGNKLGRGRNLIVLQRQLAKQSEAAVRSAVRGALAAAMDEARSKKSAKSRRK
NGAHESHNGVHGAAGANGSAGAHNGGNNGAHNSARANNSAANTFATITSQSLTSPLKEQT
NLVDWPEVPQGVIPQQIESAGRAGLLVRGYPTLVAQPTSKAFKADLKILADVNSQLAQHA
EGVLALALARTPLETARVTSRWNAKRSLFMVSAPYKSTDTLVSDLCLAAGRLLAQQWSRE
TGHNLAQLRDRKDFEVFVAWLRDRLEDQVEIIAAQVEAALEAKGQLDKAVGRNTSLALLD
TLQEIREQAAALIAPRFIADADPAQLAHYGRYLKSLAYRLEKAAASPSQDAALAYQVREI
EGQVSDAVEHAKGLPANPARAAVLRQAQNMVWELRVSLFAQQLGTAHKVSAKRISRLLAS
APAL
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacacttcagtcagcccagccaaccagacgcaactaactcagccgcagcgcca
cgccgtcgtcctgcccgccaccagcgcaatcacagacggcgccaacacaaaaaccaggcg
gcgccgcgccccttcacccccacgcagctaagccaacgcgcagcttccgtgcccaccatc
acctacccagcgcagcttccagtctcagcccgccaggaggagatcgcagccgccattttg
gctaaccaggtggttatcgtcgcaggtgaaaccggctccggtaaaaccacccagatccct
aaaatctgtttagatttaggtcgcggcgtcaacgccatgattggacacacccagccccgg
cgtatcgcagcgcgctcagtagctgaacgcattgcccaagagctgggcactaaagtttct
aaagaatcaatagtcggttatcaggttcgtttcactgatgaagttagtgaacatacgctt
ataaaattaatgaccgacggtattttgctggccgaaattcaaaacgacccgctattgcgc
cgctatgacactctaattattgacgaggcacacgagcgcagcctaaatattgactttatt
ttgggttatttagcgcggctactgcctcagcgtccagatttgaaggtcatcatcacctcg
gccaccatcgactctgaacgtttcgccgcccactttggggttgaaggccgccctgcccca
attattgaggtatccgggcgcacctatccggtagaaatccgctatcgccccctcgacggc
gtcgagccagagccagatagcagccaaacaaactcagcagctgccagcgcaagcaccgac
gagccgcgcgaccaggtcacgggcatcctcgacgccgtcgacgaactaatggccctaggc
cccggtgacattttggtgttcctggcaggagaacgcgacattcgcgataccgaagccgca
cttatcgaccatctaggcccacgctacgccgccaacgagtccagcgcccgcctgcccggc
agcgttgaaatcatccccctatattcgcgcctaagcgccgccgcccagcatcgcgtattt
gaaaaacaccgtctgcgccgcattgttctagccaccaacgtggctgaaacttcgctaacc
gtgccctccatcaggtacgtgatcgacccgggcgtggcgcgtatttcgcgttattccaac
aaaaccaaggtgcagcgcctacccattgaacccatcagccaagccagcgccaaccagcgt
agcggccgctgcgggcgtgtggccgacggcgtggcaatccgcctgtactcacaaaccgac
tatgaggggcgcgagccatacacggaacccgaaattctacgcacctccctagccagcgta
attttgcagatggcagcgctgcgcctaggtaatgtggcagattttcccttcattgacccg
ccagaccggcgcgctattgccgacggcgtggcgctactaaccgaaatcggcgctatcagc
gcaaactctaaatccatgcacgagccgcgcctgaccgcgatcggccaccaactggcgcgt
ctacccatcgacccgcgcctggggcgcatgttactggaagccaataaacgcggctgcgcc
agcgaagtgatggtgattgtctccgcgctttcaatccaagacgtgcgtgaacgcccgctt
gacgcgcaggaagccgcagacgccatgcatcggcgtttagcggaccccaccagcgatttt
ctcacctacctcaacttctggcgttacctgcgcacccagtcacgtgacctgtccggctct
gcatttaggcgcatgtgccgccacgaatacctgcactacctgcgtattcgtgaatggcgc
gacgtctacaatcagctggcccagctggcgcggccgctaggcattaacgcccaaaacatt
gagctgcccacccgtgcctccattcgcgccgctagtgaccgcctagttcccggctcccac
gcggccggcatggctaatgcggacgtagccgacgccgtcgtggccctgggacaaagcgca
gacacccccgacaccgacgcgatccaccaatccctgctggtggggctgctttccaacctg
ggtaactatgatgagcgccggcgcgaatatgccggggcgcgcgccacccacttcactatt
tggcctggtagcgggctgcgccgcaaacagtacgactgggtgatggccgctgagctggtg
gaaaccagtcgcttatttgcccgcaccgtggcccgcatccagcctcaatgggtggagcag
gccgctaaacacctggtcaaggtcacttacggtgagccttactggtccaccaagaagggc
gcggccatggtgcatcagcgggtgctgctttacgggctgactttggtggctgaccgcccg
gtcacgctagccagtgtgggtaccgacgccgcccggcaggctgcgcgggaaatgttcatt
cgctccgggctggtggaagggggctggcacgcccgccacgcttttgttgagcgcaaccgt
gagctgcttgaagacactgccgaggtggagcgtcgtcaacgcactcacggtattttggct
gatgaccaggctctttttgacttctacgatgagcgcctgccggagaaaatcaccagcgcg
gcggctttcgacaactggtggaagcatcagcgtcaagacacccccaagctgctggatttc
acccgtgagctactgcttcccgaaggtgacaaccttgacggctaccccgacacttggcat
cagggtgacctgaccttggcgcttacgtacgtttttgagccgggcaggctcgacgacggc
gtcagcgtacaggtgcccattgaggtgctcactcgcctgcgcccagagggatttgattgg
cttgtgcccgggatgcgcccgcagctgtgtgtggccactatccgcgccttgcctaagcgg
gtgcgtcgccaactagttccggcccccgacaccggcacgcgcatttgggagctgatctgc
cagctttacccgcaggctgcgggagaggctagcgacggcgtcggggccagtggcactggc
gcgtccagtaccccggacggcggggccgacggcgcggcagcgagccagcccggcggcgtc
gaaccaatcccggtgagtttccagcaggccttcacccaggccgcacagcagctacgccag
gtagaaattaccgacgaggactgggaccaggcgcaagaaaacctgccggagcacctgcgc
atgggctttagcgtgctggacgcgcgcggcaacaagctagggcgcgggcgcaacctgatc
gttttgcagcggcagctggctaaacaaagcgaggcggcggtgcgctcggcggtacgtggc
gccctggcggcggccatggatgaggcccggtccaagaaatcggcgaaatctaggcgcaaa
aacggggcccacgagagccataacggggtccatggggccgccggcgcaaacgggagcgca
ggcgcccataacgggggcaataacggtgcccataacagcgcccgcgccaataattctgcc
gcaaatacttttgcaactattacttcacagtcattaactagcccattaaaggagcaaact
aatttagttgattggcctgaagttccccagggcgtaattccgcaacaaatagaatctgcc
gggcgggcggggctattagttcgcggttaccccactttagttgcacaaccaacatctaaa
gcatttaaagctgatttaaagatattagcggatgttaattctcagctagctcagcacgct
gagggagttttggcgttagctttggcgcgcaccccgctcgaaactgcgcgggtgaccagc
cgttggaacgctaagcgctctctattcatggtgtctgcgccctacaaatccactgacacc
ctggtgtctgatttgtgcttggctgccgggcgcctgctagcccagcagtggagccgcgaa
accggccataacctagcccagctgcgtgaccgcaaagattttgaggtttttgtagcttgg
ctgcgcgaccgtctggaagaccaggtggagatcatcgccgcccaggtagaggccgctttg
gaggctaagggccagttggataaggcagtggggcgtaatacttcgctggctttgctcgac
actttgcaggaaattcgcgagcaggctgctgccctgattgcgccgcgctttatcgccgac
gccgatccggcacagctggcccactatgggcgctaccttaagtctttggcttatcgctta
gagaaggcggcggcctcgcccagccaggatgcagctctggcctaccaggtgcgtgagatt
gaggggcaggtgagcgacgccgtcgagcacgctaaggggctgccggctaatcccgcccgc
gcggcggtgctgcgccaggcccaaaatatggtgtgggagctgcgcgtgagcctgtttgcc
cagcagttggggacggcgcacaaggtttcagccaagcgcatcagccggctgctggcctcc
gccccggcgctctag
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integrated database retrieval system
