Actinomyces graevenitzii: M3I41_01310
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Entry
M3I41_01310 CDS
T08387
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agh
Actinomyces graevenitzii
Brite
KEGG Orthology (KO) [BR:
agh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agh03032
]
M3I41_01310 (topA)
03400 DNA repair and recombination proteins [BR:
agh03400
]
M3I41_01310 (topA)
Enzymes [BR:
agh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M3I41_01310 (topA)
DNA replication proteins [BR:
agh03032
]
Prokaryotic type
DNA Topoisomerases
M3I41_01310 (topA)
DNA repair and recombination proteins [BR:
agh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M3I41_01310 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UQF79941
UniProt:
A0A9E7AG13
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All DBs
Position
319565..322372
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AA seq
935 aa
AA seq
DB search
MSRKLVIVESPNKIKSISNYLGADYDVQASIGHIRDLPQPSELPANMKKGPFGKFAVDVE
GNFTPYYVVNPDKKKVVAELKRHLKEADELYLATDDDREGEAIAWHLKEVLKPKVPVRRM
TFTEITREAITRALDNTREIDIHRVDAQETRRILDRLVGYEISPVLWRKIRQGLSAGRVQ
SVATRLVVERERERMAFIPASYWGVEATFAADDSEFATRLVSLDGRRVATGRDFADDAAL
TSQAQAAKVVHLHEADAQAVAQAIEQAQAQVGKVETRPYTRRPAPPFTTSTLQQEASRKL
RLNSRDTMRVAQGLYESGYITYMRTDSTALSSQAVAAARTQIGELYGSQYVPEKPRVYAT
KNKGAQEAHEAIRPAGDHFRTPSEVKDSLQPVQFKLYELIWKRTVASQMANATGSTAVIH
VQAPLNGGASFKQAELTASGTVITFKGFLAAYEEGRDADRYEGDAKDVRLPEVSTGQELE
TRQVQASGHETTPPPRYTEASLVKALEEREIGRPSTYASIMSVISDRGYVDHRGQALVPT
WLAFAVTRLLEENFAQMVDYDFTASMEADLDRIALGEEERVAWLRRFYNGDMAADPQANI
HGAGLKTLVDNLGEIDARAVNSMEIGDGITLRVGRYGPYLEDAEGKRANVPADLAPDELS
VSKAHELFAVAAEDGRELGVDPETGHMIVAKSGRFGPYVSEVLPEPEPEAETEGKKRTRK
AAKPKPRTASLFKDMTLSSVTLDDALKLLSLPRVVGTDAEGVEISAQNGRYGPYLTKGKD
SRSLETEAELFTVTLEQALELFSQPKRRRGAAAPKGPLRELGTDPNSGLPVVIKDGRFGP
YFTDGKTNVTLRRDDDPATVTPELAYERLAEKRAKGPAKKTAAKKTTTKKTATKTTAKKA
TTKKATTKAATSKTSTSKVSTAKARAAKAAEASEA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacgcaagctcgtgattgtcgagtccccgaacaaaattaagtcaatttcaaactat
ttaggcgcggactacgacgtccaggcctccattgggcatatccgtgacttgcctcagcct
tctgagctgccggccaatatgaagaagggccctttcgggaagtttgccgtggacgtggag
ggtaacttcaccccctactatgtggttaacccggataagaagaaagtggtggctgagctt
aagcgtcacctgaaggaagctgacgagctttacctggccactgatgatgaccgcgagggt
gaagctattgcttggcacctaaaagaggtactcaagcctaaggttcccgtacgccgcatg
actttcacggaaatcacccgtgaagccatcacccgcgccctggataacacccgcgaaatc
gatattcaccgggtagatgcccaagaaacccgccgtatcctggaccgcctggtgggttac
gaaatttccccggtgctgtggcgcaagatccgtcaggggctttcggctgggcgtgtgcag
tctgtggccacgcgcctggtggtggagcgtgaacgtgagcgcatggctttcattcccgcc
agttactggggtgtggaggctacttttgccgccgacgacagcgagtttgctacccgcctg
gtctccctggatgggcgccgggtggctactggccgcgattttgccgacgacgccgcacta
acctcccaggcccaggccgccaaggtggtgcacctgcatgaggctgacgcgcaggccgtg
gcgcaggctattgagcaggcccaagcccaggtgggcaaggtggaaacccgcccctacacc
cgccgtccggccccgccattcaccacctccaccttacagcaggaggcctcgcgtaaactg
cgcctgaactcgcgcgacactatgcgtgtagctcagggcctatacgagtccggttacatc
acctatatgcgtaccgactccactgcgctttctagccaggctgtggccgccgcccgcacc
cagatcggcgagctttacggcagccagtatgtgcccgaaaagccgcgtgtttacgccact
aaaaacaagggggcccaggaggcgcacgaagctatccgccctgctggcgaccacttccgc
actcccagtgaggttaaagactccctgcagccggtgcagttcaagctgtatgagctgatt
tggaagcgcacggtggcctcacagatggctaacgccaccggctctaccgccgtgatccat
gtgcaggcccccctaaacgggggcgcgagctttaagcaggctgaactgacggcgtcggga
acagtaattacctttaagggattcctggccgcctatgaggaaggccgcgacgctgaccgc
tacgagggtgacgctaaagatgtgcgtctgccggaggtaagcactggccaggagctggaa
acccgccaggtgcaggcctctgggcacgaaaccaccccgccgccgcgctacaccgaagct
tcactggttaaggccctggaagagcgcgaaattggccgcccctccacctatgcctcgatc
atgagcgtaattagcgatcgtggctatgtggatcaccggggccaggcgctggtgcccacg
tggctggctttcgccgtcacccgtctgctggaagaaaacttcgcgcagatggtggattat
gacttcaccgcctccatggaggctgacctggaccgtattgcgttgggtgaagaagaacgc
gtggcttggctgcgtcgcttctataacggcgacatggccgctgatccgcaagccaatatt
cacggtgcgggcttgaaaactttggtggataacctgggtgaaattgatgctcgcgcggtt
aactccatggaaattggcgacggtatcaccctgcgcgtaggccgctacggcccctacctg
gaggacgctgaaggtaagcgggctaatgtgcccgcagacctggcccctgacgagctcagc
gtgtctaaggcccacgagctgtttgcggtagccgctgaagatggccgtgagctgggtgtt
gacccagaaactggacacatgattgtggctaagagcgggcgttttgggccttatgtttcc
gaggttttgccagagccggaaccggaggcagaaactgagggtaaaaagcgcacccgtaag
gctgctaagcctaagccccgcaccgccagcttgtttaaggacatgaccctgtccagcgtt
actctcgacgacgcccttaagctactgagcttgccgcgcgtggtgggcacggacgctgaa
ggcgtagaaatcagtgcccaaaacggtcgctacggcccctacctgaccaagggcaaggac
tcgcgttcgctagaaaccgaggctgagctgttcacggtgaccctagagcaggcgctggag
ctgtttagccagcccaagcgtaggcgtggcgcggctgctcccaagggtccgctgcgtgaa
ctgggcactgaccctaactctgggctaccggtggttattaaggacgggcgttttggcccc
tacttcactgacggtaaaaccaatgtgaccctgcgccgcgacgacgacccagccaccgtt
acccctgagctggcctatgagcgtttggctgaaaagcgcgccaagggaccggctaagaag
actgccgccaagaagaccaccaccaaaaagacggcaactaagaccacagctaaaaaggcc
accactaagaaggccactaccaaggctgccaccagcaaaacctcgacgtccaaggtcagc
actgctaaggccagggcagccaaggccgctgaggctagcgaggcctaa
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