Actinomyces graevenitzii: M3I41_02325
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Entry
M3I41_02325 CDS
T08387
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
agh
Actinomyces graevenitzii
Pathway
agh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M3I41_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agh03021
]
M3I41_02325
03400 DNA repair and recombination proteins [BR:
agh03400
]
M3I41_02325
Enzymes [BR:
agh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M3I41_02325
Transcription machinery [BR:
agh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M3I41_02325
DNA repair and recombination proteins [BR:
agh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M3I41_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Imm3
PEARLI-4
Motif
Other DBs
NCBI-ProteinID:
UQF80134
UniProt:
A0A9E7ANC7
LinkDB
All DBs
Position
544392..548306
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDANVFDRIHLGLASSDDIRTWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTRSKVRRERMGHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMITEVDEKSRHDDLPMLRTEFELKKKQVTERGEADVEERQRRLEAE
AAQLEAEGAKADQLEKLRRTAERDIGALRRRNLKTLEHMDKIWDRFVNLKVGDLEGDDVL
YRDMAVDYGIYFKGAKGAEAIQQRLRTFDLDKAAEELTEIVANGTGQRKTRAIKRLKVIN
AFRATNTSPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
DAPEIMVNHEKRMLQEAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVGGPQLKLHQCGLPSQMALELFKPFVMKRLVEQKRAQNVKAAKRMVERSN
PEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAPFNADFDGDQ
MAVHLPLGAEAQSEARILMLSANNILKPSDGRPVTMPAQEMIAGLFHLTSNPDPAVEVEK
DANGEPVVPAFSSFAEAKMAFDFGKLHLNALADIRFEEGITPPIGWVAPENYTEGDPITL
RTTLGRAIFNINLPGTFPYVNEIVDKKKLSDIINTLAERYPRVEVAASLDALKNSGFGWA
TWSGVTVAFSDVVSPASKPQILAGYEAQAAKIEEDFAEGMLTEDDRYDALIKIWTEATNE
VAQAMRDNFPERNTVYRMVSSGSRGNWDQIRQLAGMRGLVSDPKQRLIERPITSNYREGL
SVLEYFTATHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTRKGLTVQIADR
DAAGNLVPGEIVETTAYARTLARDAVDAEGNVVLAAGEDVGDVAIEKLVAAGIESIVIRS
VLTCDSAVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAATSA
DITQGLPRVQELFEARTPKGEAVVAEAAGRLAIEDDVDGKRLVIKRDDAEEDLVVPVSRR
AKLLVKEGDHVDPGQPMTEGPIDPKKVLRLRSVSATQRHLVDEVQKVYRDQGVDIHAKHI
EVIVRQMLRRVTVLDPGDTELLQGDFVDVMTFREQSRKAMAEGGKPASGRTELMGITKAS
LATDSWLSAASFQETTRVLTEAAMNGRSDTLMGLKENVILGKLIPAGTGLARYHDVEVEP
TEAAKAEIFSRTGDTQVTNNYGLGDFHADFSDDYHTGFSTDYQF
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgctaacgtcttcgatcgcattcacctgggcctagcctcctcggatgacatc
cgcacctggtcacgcggcgaggttaagaagcctgaaaccatcaactaccgtaccctcaag
cccgagaaggacggtctcttctgcgagaagattttcggtcctacccgcgactgggagtgc
tcttgcggtaagtacaagcgtgtacgttacaagggcatcatttgtgagcgctgtggggtc
gaggttactcgctccaaggtgcgccgtgagcgcatgggtcacatcaagctggccgctccg
gtaactcacatctggtacttcaagggtgtgccttcacgcctgggctacctgctcaacctg
gcccccaaggacctagagaaggtcatttacttcgccgcttacatgatcaccgaggtggac
gagaagtctcgccacgatgatctacccatgctgcgcactgagtttgagctcaagaagaag
caggtcactgagcgcggtgaagctgacgtggaagagcgtcagcgtcgcctagaagctgaa
gcggcccagctggaggctgagggcgccaaggctgatcagcttgagaagctacgccgcacc
gctgagcgcgacattggtgcgctgcgtcgtcgtaacctcaagaccctagagcacatggac
aagatctgggatcgtttcgttaacctcaaggtcggtgacctggagggcgacgacgttctc
taccgtgacatggcggttgactacggcatctacttcaagggtgccaagggtgctgaggcc
atccagcagcgtctgcgtaccttcgacctagacaaggccgctgaggagctgaccgagatc
gtcgctaacggcaccggccagcgcaagacccgcgccatcaagcgtctgaaggtaatcaac
gctttccgcgccaccaacaccagccccgaggctatggtgctggatgttatcccggtaatc
ccgccggacctgcgccccatggtgcagctcgatggtggccgcttcgctaccagtgacctc
aacgacctctaccgtcgtgtgattaaccgtaacaaccgtctcaagcgcctaatggaccta
gacgcccccgagatcatggttaaccacgaaaagcgtatgctgcaggaagctgtggacgcg
ctgttcgacaatggtcgccgtggccgcccggttaccggcgtcggtaaccgcccgctcaag
agcctgtctgacatgctcaagggtaagcagggtcgtttccgtcagaacctgctgggtaag
cgtgtggactactctggccgttcggtaatcgtcggtggcccccagctcaagctgcaccag
tgtggtctgcccagccagatggccctggagctgttcaagcccttcgttatgaagcgcctg
gttgagcagaagcgagctcagaacgttaaggccgccaagcgtatggtggagcgttctaac
cccgaggtttgggacgtactggctgaggttattcgtgagcacccggtgctgcttaaccgt
gcacctaccctgcaccgtctgggtatccaggctttcgagccccagctgattgagggtaaa
gctatccagctgcacccgctggtatgtgcccccttcaacgctgacttcgacggcgaccag
atggctgtgcacctgccgctaggtgcagaggcccagtctgaggcccgcattttgatgctc
agtgccaacaacattcttaagccttccgatggtcgcccggtgaccatgccggcccaggaa
atgattgccggtctgttccacctgactagcaaccctgacccggcggttgaggttgaaaag
gacgctaacggtgagccggtagtgcctgctttctcctccttcgctgaggccaagatggct
ttcgacttcggcaagctgcacctaaacgcgctagctgacattcgttttgaagagggcatc
accccgcccatcggctgggtagctccggagaactacaccgagggtgaccccatcaccttg
cgtaccaccctgggccgcgccatcttcaacatcaacctgccgggtaccttcccctacgtc
aacgagatcgttgacaagaagaagctctccgacatcattaacactctggctgagcgttac
ccccgcgtggaggtagccgcctcgctggatgccttgaagaactccggtttcggctgggcc
acctggtctggtgtgaccgtagccttctccgacgtggtttcgcccgcttctaagccccag
attctggctggctacgaagcccaggctgccaagatcgaagaagacttcgctgaaggtatg
ctcaccgaggatgaccgttatgacgcgctgatcaagatctggactgaagccactaacgag
gtggcccaggctatgcgcgacaacttccctgagcgcaacacggtttaccgcatggtttcc
tccggttcgcgtggtaactgggaccagatccgccagctggcgggtatgcgtggtttggtg
tctgaccccaagcagcgtctgattgagcgcccgattacctccaactaccgtgagggtcta
agcgttctggagtacttcaccgctacccacggtgcccgtaagggtctggccgacaccgct
ctgcgtaccgccgactcgggttacttgacccgtcgtctggtggacgtggcccaggacgtg
attgtgcgtgaagaggactgtggcacccgcaagggtctaaccgtccagattgctgaccgc
gacgctgccggcaacctggttcccggcgagatcgtggagaccaccgcctacgcccgtacc
ctggcccgcgacgccgtggacgctgagggcaacgtggtgctggctgctggtgaggacgtc
ggcgacgtcgccattgagaagctggtggctgccggcatcgagtccatcgtgattcgttcc
gtgctcacttgtgactccgccgtcggtacctgtgccgcctgctatggccgttcgctggcc
accggtaagcgtgtggacatcggtgaggctgtgggtattattgccgcccagtccattggt
gagcccggtacccagctgaccatgcgtaccttccacaccggtggtgcggctaccagtgcc
gacatcacccagggtctacctcgtgtgcaggagcttttcgaagcccgtacgcctaagggt
gaggccgtggtggctgaggctgctggccgcctggctattgaggacgacgtcgacggtaag
cgcctggtcattaagcgtgacgatgccgaagaggacctggtggttccggtttcgcgccgc
gccaagctgctggtgaaggaaggcgaccacgttgacccgggtcagcccatgactgagggt
ccgattgaccccaagaaggtgctgcgtctgcgttcggtttctgccacccagcgtcacctg
gtggatgaggtccagaaggtgtaccgcgaccagggtgtggacatccacgccaagcacatt
gaggttattgtgcgccagatgctgcgccgcgtaaccgtgcttgacccgggtgacaccgag
ctgctgcagggtgactttgtggatgtgatgaccttccgcgagcagtcgcgcaaggctatg
gctgagggcggcaagcccgcctcgggccgtaccgaactgatgggtatcaccaaggcctcc
ttggctaccgactcgtggctgtctgccgcctccttccaggaaaccactcgcgtgctcact
gaggccgccatgaacggccgctctgacaccctgatgggcctgaaggagaacgtcatcctc
ggtaagctgatcccggccggtaccggtctggcccgctaccacgatgttgaggtggagccc
accgaggccgctaaggcggagattttctcccgcactggcgacacccaggtaaccaacaac
tacggtctaggcgatttccacgcggacttctccgatgactaccacactgggttctccacg
gactaccagttctga
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