Actinomyces graevenitzii: M3I41_04280
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Entry
M3I41_04280 CDS
T08387
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
agh
Actinomyces graevenitzii
Pathway
agh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3I41_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agh03019
]
M3I41_04280
03009 Ribosome biogenesis [BR:
agh03009
]
M3I41_04280
Enzymes [BR:
agh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M3I41_04280
Messenger RNA biogenesis [BR:
agh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3I41_04280
Ribosome biogenesis [BR:
agh03009
]
Prokaryotic type
rRNA helicases
M3I41_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
UQF80482
UniProt:
A0A9E7ANC1
LinkDB
All DBs
Position
complement(999403..1001763)
Genome browser
AA seq
786 aa
AA seq
DB search
MSNPLSLDDLFEAQLKSTSAASAATPEDIADASESISPADPVDIDHEDEADDVDTDRPEL
DPESYSEDDDDAELTPTGPTFADLGLPRDLLRAITDMGFVSPTDIQREAIPVLLEGRDVV
GVAQTGTGKTAAFGLPLLNEVDSRDGEVQALVLAPTRELAMQSADAIADMAHRSRGLDVV
AVYGGSPYGPQIAALREGAQVVVGTPGRVIDLIEKGALVLDHVRYFVLDEADEMLRMGFA
EDVETIAASLPTERRTALFSATMPPAIESVAAEHLNDPVRIEVSRQSSTVDSVQQSYAVV
PFRHKVGAVSRILAVTDAEAAIVFVRTKSTAEDVAIELSGRGIQAAAISGDVPQRERERL
IERLRQGSLDVLVATDVAARGLDVDRIGLVVNFDVPREAEAYVHRIGRTGRAGRTGEAIT
FLTPKEKGKLRQIERLTGARLEEITLPSPADVSRHRAAKLLKRADERAQKGRLDIYHELI
AKEVSSLDSATLAATLLALAVGDDGPRWQREDSGRKERREVQVDSEGTFISASFEHGRER
PARENRPERPRRAPRRDDEGGTVYRVEVGHRDKVLPGAIVGALANEGGISGSDIGKIDIL
QSFSLVTIYAPLDEQTLQRMGKATFAGRELRIRPDEGPGHGWSGPNDRHKAKGMRDDADS
EGGRSAYRPRREEGRYDREDRGFKRDDRGFKREDRGFKRDDRGFKREDRGFKRDDRGFKR
EDRGFKREDRGFKREDRGFKRDDRGGRFNERSNSRGGYSGYRDERSGYQRGSNRDDRGGY
GRSKRY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccccttagcctagatgacctgtttgaggcccagctaaaatccacctctgct
gccagcgcggccacgcctgaagatatcgctgacgctagcgagtccatttccccagccgac
ccggtagacattgaccacgaggacgaggccgacgacgtcgacactgaccgcccggagcta
gaccccgagtcatacagtgaagatgacgacgacgccgagctaacccccaccggccccact
ttcgctgacctgggcctgccgcgcgacttgctgcgcgccatcaccgacatgggttttgtt
agccccaccgacattcagcgcgaggcgatcccggtgctgctggaaggccgcgacgtcgtc
ggtgtagcccaaaccggtaccggcaagaccgccgctttcggcctgcccctactaaatgag
gtagacagccgtgacggtgaagtacaggccttggttttggcccccacccgtgagctggcc
atgcaaagcgccgatgcgattgccgatatggctcaccgcagccgtggtctagatgttgtg
gccgtctacggtggtagcccctacggtccccagattgcggcgctacgtgaaggcgcccag
gtggttgtgggtacccccgggcgcgtaattgacctgatcgaaaagggtgcgctggtacta
gaccacgtgcgttacttcgtgctcgatgaagccgatgaaatgctgcgcatgggctttgct
gaggatgtagaaaccattgccgcttcgctgcctaccgagcgacgcaccgccctatttagc
gccaccatgcctccggcaattgagtcggtggccgctgagcacctaaacgacccggtacgt
attgaggtttcacgccagtcctccactgtggattcggtgcagcagtcttacgcggtggtg
cctttccgtcacaaggtgggtgcggtttcgcgcatcttggccgtgactgatgctgaagcc
gcgattgtctttgtgcgcaccaagtcaactgctgaggatgtggccattgagctgtctggt
cgtggcattcaggccgccgccatcagtggtgacgtaccccagcgtgaacgtgagcgtctg
attgagcgcctgcgccagggtagcttggatgtgctggtggccacggatgtggccgcgcgt
ggtttggatgtggaccgtatcggtctggtagttaactttgatgtgccgcgtgaggctgag
gcctatgtgcaccgtattggtcgtactggccgcgccgggcgcaccggtgaagctatcact
ttcctgacccctaaggagaagggcaagctacgccagattgagcgtctgaccggggctcgc
ctggaggaaatcaccctgccctcccccgctgacgtgtcgcgtcaccgcgccgctaagcta
ctaaagcgcgccgatgaacgcgctcaaaagggccgtctggacatctaccacgagctgatc
gctaaggaagtttcttccctggatagcgccactttggctgctaccttgctggctttagcg
gttggcgacgacggcccgcgctggcagcgtgaggactctggccgcaaggagcgccgtgag
gtgcaggtagattctgaaggcaccttcatttctgccagctttgagcatggccgtgagcgt
cctgcccgcgagaacaggcctgagcgtccgcgtcgcgccccgcgtcgtgacgatgagggc
ggcacggtttaccgcgtcgaggtgggtcaccgcgacaaggttctgcccggcgcaattgtg
ggtgcactagctaatgagggcggcatttccggctccgacattggcaagatcgacattttg
cagtctttctcgctggtcactatctatgcgccgctagatgagcagactttgcagcgcatg
ggtaaggccaccttcgctggccgtgaactgcgtattcgcccggatgagggccccggtcac
ggctggagcggcccgaatgatcgccacaaggctaagggtatgcgcgacgacgccgattct
gagggcggccgttcggcttaccgcccacgtcgcgaagagggccgctatgaccgtgaggac
cgtgggttcaagcgcgacgatcgcggtttcaagcgtgaggaccgtggctttaagcgtgac
gatcgcggtttcaagcgtgaggaccgtgggttcaagcgcgacgatcgcggtttcaagcgt
gaggaccgtggtttcaagcgtgaggaccgtggtttcaagcgtgaggaccgtggctttaag
cgtgacgatcgcggcgggcgctttaacgagcgttccaactcgcgcggcggatattccggt
taccgtgatgagcgctctggttaccagcgcggctctaatcgcgacgaccgtggcggctat
ggccgctccaagcgctactga
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