Actinomyces graevenitzii: M3I41_04755
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Entry
M3I41_04755 CDS
T08387
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
agh
Actinomyces graevenitzii
Brite
KEGG Orthology (KO) [BR:
agh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agh03016
]
M3I41_04755
Enzymes [BR:
agh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M3I41_04755
Transfer RNA biogenesis [BR:
agh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M3I41_04755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UQF78931
UniProt:
A0A9E7DBR9
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All DBs
Position
1118906..1120180
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AA seq
424 aa
AA seq
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MSTGEPSRKITVPANGLPDLTDTPQKLRLAAKRLRAGTGPVAVDTERASGYRYGQDAYLV
QLRRDGVGTLLIDPVGTGRDFSCINDALTGVEWILHAADQDMPCLAKLGMRPDALFDTEL
AARILGREKRGLGHLIEDTLGWHLAKEHSAADWSVRPLPTAWLNYAALDVELLIDLRSAL
LTELELAGKLQWALAEFEFERTAPPRPERVDPWRHMHGAGKVTTARGRAILRNLWLTREE
IAKAQDLPPVKVLPHYAIVAVAKRMPNSRKQLRAIREMSSRDARAYMEQWWKAVDSAMKL
PESQLPKPIDLAPAGKVPELRVWSRRYPLHFEVLQAVRETMHSYAAQLTLIQENLLYPGL
QRKLAWYWHPGMDVAEYLADNGARAWQIHQLAQALQLRLEGLGLTQAQLQADRAYKREAG
SKKR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcactggtgaaccctcgcggaaaattacagttccagcaaacggtttaccagatctg
actgacactccccagaaacttcgtttagctgctaagcgtttacgcgccggtaccggtccc
gtggcggtagatactgaacgcgcttcaggttaccgttacggccaggatgcttatctggtg
cagctacgtcgcgacggcgtgggcaccttactgattgacccagtaggtacaggccgcgat
tttagctgcatcaatgatgctctaactggagtggagtggattttacatgcggcagatcag
gatatgccctgcctagccaagcttggtatgcgcccagatgcactttttgacactgagctg
gctgcccgtattttaggacgcgaaaagcgcgggctaggacacctgattgaagacacttta
ggctggcatttagccaaagagcactctgctgctgactggtcagtgcggccgctgcctact
gcctggcttaactacgctgctctagatgtggagctactaattgacctacgttcagctcta
ctaactgagctagaactagccggaaaactacagtgggcgctagccgaatttgaatttgaa
cgcaccgctcccccacgccctgaacgcgtagatccctggcgtcacatgcatggagccggt
aaggtaaccaccgcgcgcggacgagcaattttgcgtaacctatggcttacccgcgaagaa
atagctaaagcgcaagatctaccaccagtgaaggtactgccgcattacgcgatcgtagcc
gtggctaaacgtatgccaaattcgcgtaaacagctacgggctattcgagagatgtcatcg
cgcgatgctcgcgcatatatggagcaatggtggaaggcagttgatagcgctatgaagctg
ccagaatcacagctacctaaacccatagatttagctcctgcaggtaaagtaccagaactg
cgggtatggtcacgacgctacccgctacattttgaagtactacaagcagtacgcgaaact
atgcacagctacgctgcacagttaactttaatccaggaaaacctgctttaccctggtttg
caacgaaaattagcctggtactggcacccaggcatggatgtggccgaatacctagctgat
aacggtgctagggcatggcaaattcaccagttggcccaagctttgcagctgcgcttagaa
ggattaggccttacacaagcgcagctgcaagctgaccgggcatataagcgtgaggctggc
tctaaaaaacgttaa
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