Acetobacter ghanensis: AGA_821
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Entry
AGA_821 CDS
T11583
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aghn Acetobacter ghanensis
Pathway
aghn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aghn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGA_821 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aghn03021
]
AGA_821 (rho)
03019 Messenger RNA biogenesis [BR:
aghn03019
]
AGA_821 (rho)
Transcription machinery [BR:
aghn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AGA_821 (rho)
Messenger RNA biogenesis [BR:
aghn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AGA_821 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
AAA_22
ATPase_2
AAA
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
CEF54514
UniProt:
A0A0U5BGV8
LinkDB
All DBs
Position
I:complement(757366..758664)
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AA seq
432 aa
AA seq
DB search
MHLAELKAKSPADLLACAEDLNIENASSLRKQDMMFAILKTLADNDQAIYGEGTLEIMHD
GFGYLRAPESNYLPGPDDIYISPTQVRRFGLRTGDTVEGQIRAPRDGERYFSMLKINTIN
FESPDAVRHRINFDNLTPLYPERRLQMEVESQATAPEPKGDKNKKGSQKDFTPRVIDLVS
PIGMGQRALIVAPPRSGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARSVRGE
VIASTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLT
GGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVLD
RKLADKRTFPAIDITKSGTRKEELLVDRSTLSKMWVLRRILAPMGTMDAMDFLLDKLKYS
KTNNDFFEAMNN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgcggaactcaaggccaagtccccagccgaccttctggcctgcgctgaagac
ctgaatatcgaaaacgcgtcctccctgcgcaagcaggacatgatgttcgccattctcaaa
acgctggctgataacgatcaggccatttatggcgaaggcacgcttgagatcatgcatgac
gggtttggctacctgcgtgcgcccgaatccaactaccttcccggcccggatgatatttat
atctcccccacccaagtccgccgctttggcctgcgcacgggtgatacggttgaagggcag
attcgcgctcccagagacggcgaacgctacttctccatgctcaagatcaacacgatcaat
tttgagtcccccgacgcggttcgccaccggatcaactttgataacctaaccccgctctac
cccgagcgccgcctccagatggaagtggaaagtcaggctaccgcccccgaacccaagggc
gacaaaaacaaaaagggctcccagaaggacttcaccccgcgggtgattgatctggtatcc
cccattggcatgggccagcgcgccctgatcgtggcccccccacgctcgggtaagacggtc
atgctccagagcattgcatcgtccatttcggccaaccaccccgaagtgttcctgattgtg
ctgctgattgacgaacgccccgaggaagtgaccgacatggcccgctccgtgcgcggcgaa
gttattgcctcgacctttgatgaaccagcccaccgccatgtgcaggtgaccgaaatggtg
ctggaaaaagccaagcgccttgtggaacacaagcgcgacgtggtgatcctgctcgattcc
attacccgtctggcccgcgcctacaacactgttgttccctcatcgggcaaggtgctgacc
ggtggtgtggacgccaacgccctgcagcggcccaagcgcttctttggtgcggcccgtaac
atcgaggaaggtggctccctgaccattatcgccaccgccctgattgataccggcagccgt
atggacgaagtgatctttgaagagttcaagggcacgggtaactcggaactggtgcttgac
cgcaagctggctgacaagcgcaccttccctgccattgacatcaccaagagcggcacccgt
aaggaagagctgctggttgaccgctccaccctgtccaaaatgtgggttctgcgccggatt
ctggcacctatgggcaccatggacgccatggacttcctgctcgacaagctgaaatacagc
aaaaccaacaatgacttctttgaagccatgaacaactag
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