KEGG   Arachidicoccus ginsenosidivorans: FSB73_00475
Entry
FSB73_00475       CDS       T06150                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
agi  Arachidicoccus ginsenosidivorans
Pathway
agi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:agi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FSB73_00475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:agi03021]
    FSB73_00475
Transcription machinery [BR:agi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FSB73_00475
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 GerE Sigma70_ECF HTH_28 HTH_23 HTH_38 Terminase_5 HTH_11 HTH_40 HTH_10 HTH_29 HTH_VMAP-M9 UPF0122 Sigma70_r2 wHTH_Par HTH_SB HTH_Tnp_ISL3 HTH_20 HTH_Tnp_1 HTH_5 PF0610-like_N HTH_7 DUF2774 NirdL-like_HTH NUMOD1
Other DBs
NCBI-ProteinID: QEC70411
UniProt: A0A5B8VH38
LinkDB
Position
140327..140884
AA seq 185 aa
MLEKIMNGDQKAFSDFYLLWEARIYTYFLNRTGDYIQSQELTQNTFIKIWEYRSTLSTDY
NIETQLFRKAKLIYIDWLRMQITLRKRKAAEENYAFQKEAIESNAGQNGGASIPERLEKA
ISHLPPMRQKVLRLSHLQGYAYKEIARELNISEKTVDNHIHKALKQLRQILSSLLFILLL
FSKFL
NT seq 558 nt   +upstreamnt  +downstreamnt
ttgctcgaaaaaataatgaatggggatcaaaaagcattcagcgacttttaccttttgtgg
gaggcgcggatctatacgtatttcctgaatcgaaccggtgattatatccaaagccaggag
ctgacacaaaatacttttataaagatctgggaatacagatccacacttagcactgattat
aatatagaaactcagttgtttagaaaagcgaagctgatttatattgactggttacggatg
cagattactttacgtaagcgtaaagcggcggaggagaattatgcattccaaaaggaagca
attgaatcgaatgcaggccaaaatggtggagcatctattccggaaagattggaaaaggct
attagtcacttgcctcctatgcgtcaaaaagtacttcggctctcccacttgcagggatat
gcctataaagaaatcgctcgtgaactgaatatttctgaaaaaacagtcgataatcatatt
cataaggcgctcaaacaattacgtcagattttgagtagtctgctattcattttgctatta
ttttccaaatttctttaa

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