KEGG   Aphidius gifuensis: 122847665
Entry
122847665         CDS       T07796                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
agif  Aphidius gifuensis
Pathway
agif03030  DNA replication
agif03410  Base excision repair
agif03420  Nucleotide excision repair
agif03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122847665
   03410 Base excision repair
    122847665
   03420 Nucleotide excision repair
    122847665
   03430 Mismatch repair
    122847665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agif03032]
    122847665
   03036 Chromosome and associated proteins [BR:agif03036]
    122847665
   03400 DNA repair and recombination proteins [BR:agif03400]
    122847665
DNA replication proteins [BR:agif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122847665
  DNA Replication Termination Factors
   ELG1-RFC complex
    122847665
Chromosome and associated proteins [BR:agif03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122847665
DNA repair and recombination proteins [BR:agif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122847665
  Check point factors
   HRAD17(Rad24)-RFC complex
    122847665
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_22 AAA_11 Mg_chelatase AAA_assoc_2 bpMoxR Rad17 AAA_24 Gp44_lid AAA_30 AAA_14 ResIII DEAD DUF815 AAA_19 SLFN-g3_helicase AAA_7 RuvB_N DNAX_ATPase_lid AAA_3 ATPase_2 AAA_5 BsNagA_N
Other DBs
NCBI-GeneID: 122847665
NCBI-ProteinID: XP_044001413
LinkDB
Position
LG1:complement(9025893..9027714)
AA seq 357 aa
MQSFLKTGKIGNNDGKKPSTSKDKPKKPAPSPPWVEKYRPRTVEDVVEQGEVVEVLRQSM
SGGDFPNLLFYGPPGTGKTSTILAAARQLFGSMYKDRILELNASDERGIQVIREKVKSFA
QLTAGDKRPDGKPCPPFKIIILDEADSMTGKAQSALRRTMEKASHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGQEKIIERLESICNAEDVKADKYVLTKLVDASGGDLRRAITSLQS
VTRLKGVGIEITLDDVLEVTGVIPDRWINKLLEVCEGKDYNNVTNFIDDFLLEGYGTGQV
IEQLSERIIFSDDLTDKQKAIIGEKLGVCSFRLLEGGSEYIQLLDLCITIMQVNQQN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaatcatttttaaaaacaggtaaaattggtaataatgatggtaaaaaaccatcaaca
tcaaaagataaaccaaaaaaaccagcaccatcaccaccatgggtagaaaaatatcgtcca
agaactgttgaggatgttgttgaacagggtgaagttgttgaagtattacgtcaatcaatg
agtggtggtgattttccaaatttattattttatggaccacctggtactggtaaaactagt
acaatattagcagctgctagacaattatttggaagtatgtataaagatagaatacttgaa
ttaaatgcatcagatgaaagaggtatacaagttatcagagaaaaagttaaatcatttgct
caattaactgctggtgataaaagacctgatggtaaaccatgcccaccatttaaaataata
attcttgatgaagctgatagtatgactggtaaagcacaatcagcactacgtcgtacaatg
gaaaaagcatcacacagtacaagattttgtcttatttgtaattatgtatcaagaataatt
gaaccattaacatcacgttgtacgaaatttcgttttaaaccacttggtcaagaaaaaata
attgaacgtttagaatcaatatgtaatgctgaagatgttaaagctgataaatatgtttta
acaaaacttgttgatgcatcaggtggtgatctacgtagagcaataacatcattacaatct
gtaactagattaaaaggtgttggtattgaaataaccttggatgatgtacttgaagttact
ggggttattccagatcgttggataaataaactattagaagtttgtgaaggaaaagattac
aataatgttactaattttattgatgattttttattggaaggatatggaactggtcaagtt
attgaacaattgagtgaaagaattatattttctgatgatttaactgataaacaaaaagca
attattggtgaaaaacttggtgtatgttcatttagactcttagaaggaggcagtgaatac
attcaacttcttgatttatgcataacaataatgcaagttaatcagcaaaattaa

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