Aphidius gifuensis: 122848170
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Entry
122848170 CDS
T07796
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
agif
Aphidius gifuensis
Pathway
agif04120
Ubiquitin mediated proteolysis
agif04137
Mitophagy - animal
agif04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122848170
04120 Ubiquitin mediated proteolysis
122848170
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122848170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agif04131
]
122848170
04121 Ubiquitin system [BR:
agif04121
]
122848170
03029 Mitochondrial biogenesis [BR:
agif03029
]
122848170
Enzymes [BR:
agif01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122848170
Membrane trafficking [BR:
agif04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122848170
Aggrephagy
Other aggrephagy associated proteins
122848170
Xenophagy
Other xenophagy associated proteins
122848170
Ubiquitin system [BR:
agif04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122848170
Mitochondrial biogenesis [BR:
agif03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122848170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
122848170
NCBI-ProteinID:
XP_044001984
LinkDB
All DBs
Position
LG2:complement(1022317..1024532)
Genome browser
AA seq
492 aa
AA seq
DB search
MNFIYEFLRNIITTMLQLIWSSKGKITNSLSIYVKTNTGNTLTVNLDPKWDIKNVKEIVA
PQMGISPEDVKIIFAGKELHNSTIIEECDLGQQSILHAVKMPKKKLKKPKITIDELSEVS
ELNESGSKPMNETLSDLSFDDSNNTIDDDKKRAHFYIYCSKPCKNVEAGKLRVKCSLCSS
GAVTVDRDPQSWQDVLKKNRITVHCENDYCQSAQSNTQDDIQLSYAKFFFKCSNHPSLGE
NDEAVPLYLIKPNFKNIPCLACTDIKDTVLVFSCESSHVTCIDCFKEYCCVKLSERQFEF
DDKSGYYTLPCPAGCDNSYINEVHHFRLLDNRQYEQYQRFGAEEYVLRAGGLLCPQPDCG
MGIIPSNSDDVDDDNCRKIQCIGGCGYVFCKKCLNGFHLGDCDSQQPVASSSQSKFGGYS
VDPNRAKDATWSEATKRTIQKSTKPCPKCRTPTERDGGCMHMFCTRAGCNFQWCWVCQTS
WSRDCMGNHWFG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatttatgagtttctaagaaatattatcacaacaatgttacaattaatatgg
tcaagtaaaggaaaaataacaaattcattgagtatttatgttaaaacaaatactggaaac
acactgactgttaatctagatccaaaatgggatattaaaaatgtcaaagagatagtagct
ccacaaatgggtatatcaccagaagacgttaaaataatatttgctggtaaagaattgcat
aattcaacaataatagaggaatgtgatttgggtcaacaaagtatactacatgctgttaaa
atgccaaagaaaaagttaaaaaaaccaaaaataacaattgatgagttatcagaagtatca
gagttaaatgagagtggaagtaaaccaatgaatgaaacattgagtgatttatcatttgat
gattctaataatacaattgatgatgataaaaaacgtgcacatttttatatttattgttca
aaaccatgtaagaatgttgaagctggtaaattacgtgttaaatgtagcttatgttcaagt
ggtgctgtaactgttgatagagatccacaatcatggcaagatgtattaaaaaaaaatcgt
ataacagtacattgtgaaaatgattattgtcaatcagctcaatcaaatacacaagatgac
attcaattatcatatgcaaaatttttttttaaatgttcaaatcatccaagtcttggtgaa
aatgatgaagcagtaccactttatttgataaaaccaaattttaaaaatataccatgtctt
gcttgtactgatattaaagatacagtattagtattttcatgtgaatcatcacatgttaca
tgtattgattgttttaaagaatattgttgtgttaaattatcagaacgtcaatttgaattt
gatgataaatctggatactatacattaccatgtccagctggttgtgataattcatatata
aatgaagttcatcattttagactacttgataatcgtcagtatgaacagtatcaaagattt
ggagctgaagaatatgttcttcgagctggtggtttattatgtccacagcctgattgtgga
atgggaataattccatcaaattctgatgatgttgatgatgataattgcagaaaaattcaa
tgtattggaggatgtggttatgttttttgtaaaaaatgtttaaatggttttcatcttggt
gattgtgatagtcaacagccagttgcttcaagttcacaatcaaaatttggtggatattct
gttgatccaaatagagccaaagatgccacttggagtgaagcaacaaaaagaacaattcaa
aaatcaacaaaaccttgtccaaaatgtagaactccaactgaacgtgatggtggatgtatg
cacatgttttgcacaagagctggatgtaattttcaatggtgctgggtttgtcaaacttct
tggtctagagattgcatgggaaatcattggtttggctag
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