Aphidius gifuensis: 122848272
Help
Entry
122848272 CDS
T07796
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122848272
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122848272
Spliceosome [BR:
agif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122848272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
KH_2
KH-I_KHDC4-BBP
AAA_30
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
122848272
NCBI-ProteinID:
XP_044002174
LinkDB
All DBs
Position
LG2:complement(2364765..2368170)
Genome browser
AA seq
792 aa
AA seq
DB search
MDWENQSNDGNDNSGRGQSKNSRGHDRREYNNDRNSYPQKREWKNTNRNYGDDEDVMLFP
LPEGTIGRVIGRGGSMIRELQTESGAKIEIDKTNGYNAASTARISGSKESQNKAKELIQK
LIDSPPSRNYDPQSSRNNDQQSSRNNDRPSSRNNDQQSSRNNDRPSSRNNDQQSSRNNYQ
QSSRNNYQQSSRNNYNDGQQNNDSWEDQSMSNNKQVSQSSNDNKNESAWGGQSRDNKYKS
EQHQKTQSSYENKNESMWNQTPDEKKCETTKQDVEEDPLDFSNFDWTSANKEHEEFQKQR
WANLKPLIKVFYQELPEVANLTDEDVARIRKEKNGIECRYVFEPESDKPKVPNPITTFNQ
AFHNYPDILNEIKKVGFEKPSPIQSQAWPILLSGKDMIGIAQTGTGKTLAFLLPALIHID
GQKTPREERVGPSVLIMAPTRELAQQISKEASKYSYRGIKAVTVFGGGDRREQITSIKKG
VQIVIATPGRLNDLVMAGELKVEDVTYLVLDEADRMLDMGFEPQIRKTLLDVRPDRQTVM
TSATWPAGVRRLAQSYMQDPIQVCVGSLDLTAAHSVRQTILVVDDEDKTYHLREFFKTMK
DNDKVIVFFCKKSRVDDISSELALAGVNCQSMHGGRDQSDREQALEDIRDGEVNILLATD
VASRGIDINDITHVFNYDFPKDVEEYVHRVGRTGRAGKTGESISLFTRGNWSVARQLLAI
LEEASQEIPEELYNMADRYDSWRKRKDEEKELERLDGGGGFRGRGRGGGGRGRGGGGGRG
GGGGGGRGGNRW
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggattgggagaatcagtcaaatgatgggaatgacaatagtggtcgtggtcaatcaaaa
aattcacgtggtcatgatcgtcgtgaatacaacaatgacagaaattcatatccacaaaaa
cgtgaatggaaaaatactaatagaaattatggagacgatgaggatgtcatgttatttcct
ttgccagaaggtacaattggtagagttattggacgtggtggttctatgattagagaacta
caaactgaatctggtgctaaaattgaaattgataaaacaaatggttataatgctgcatca
actgctcgtatatcaggatcaaaagaatcacaaaataaagctaaagaattgattcaaaaa
ttaatagattcaccaccatctcgcaattatgatccacaatcatctcgtaataatgatcaa
caatcatctcgtaataatgatcgaccatcatcccgtaataatgatcaacaatcatctcgt
aataatgatcgaccatcatctcgtaataatgatcaacaatcatctcgcaataattatcag
caatcatctcgcaataattatcaacaatcatctcgtaataattataatgatggtcaacaa
aataatgattcatgggaagaccaatcaatgagtaataataaacaagtatctcaatcatca
aatgacaataaaaatgaatctgcatggggtggacaatcaagagataataaatataaatca
gaacaacatcaaaaaacacaatcatcatatgaaaataaaaatgaatctatgtggaatcaa
acaccagatgaaaaaaaatgtgaaactacaaaacaagatgtagaagaagatcctcttgat
tttagtaattttgattggacatcagcaaataaagaacatgaagaatttcaaaaacaaaga
tgggcaaatttaaagccacttattaaagttttttatcaagaattaccagaagttgctaat
ttaacagatgaagatgttgcacgtattagaaaagaaaaaaatggtattgaatgtcgttat
gtatttgagccagaaagtgataaaccaaaagtaccaaatccaataacaacatttaatcaa
gcatttcataattatccagatatattaaatgaaataaaaaaagttggttttgaaaaacca
agtccaatacaatcacaagcatggccaatattattaagtggtaaagatatgattggtatt
gcacaaactggtactggtaaaacattggcatttttattaccagcattaatacatattgat
ggacaaaaaacaccacgtgaagaacgtgttggtccaagtgtattaataatggcaccaaca
agagaacttgcacaacaaattagtaaagaagctagtaaatatagttatcgtggtattaaa
gctgtaacagtatttggtggtggtgatagacgtgaacaaataacatcaataaaaaaaggt
gtacaaattgttattgcaacaccaggtagattaaatgatttagttatggctggtgaatta
aaagttgaagatgtaacatatcttgtacttgatgaagctgatagaatgttagatatggga
tttgagccacaaattagaaaaacattacttgatgttagaccagatcgtcaaacagttatg
acaagtgcaacatggccagctggtgtacgtcgtcttgcacaatcatatatgcaagatcca
atacaagtatgtgttggttcacttgatttaacagctgcacatagtgtacgtcaaacaata
cttgttgttgatgatgaagataaaacatatcatttacgtgaattttttaaaacaatgaaa
gataatgataaagttattgtatttttttgtaaaaaaagtagagttgatgatatatcaagt
gaacttgcacttgctggtgttaattgtcaaagtatgcatggtggacgtgatcaatcagac
agagaacaagcacttgaagatattagagatggtgaagttaatatattattggcaactgat
gttgctagtagaggaattgatattaatgatataacacatgtatttaattatgattttcca
aaagacgttgaggaatatgtacatcgtgttggaagaactggtagagctggtaaaacgggt
gaaagtattagtttatttacaagaggaaattggtcagttgcacgacaactattagcaata
cttgaggaagctagccaagaaataccagaggagttgtacaacatggctgatcgttatgat
agttggagaaaacgtaaagacgaagaaaaagagcttgaacgtcttgatggtggaggagga
tttagaggtagaggacgtggtggtggtggacgaggtcgtggaggtggtggaggacgtgga
ggtggtggtggtggtggacgtggaggtaatcgttggtaa
DBGET
integrated database retrieval system
