Aphidius gifuensis: 122848405
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Entry
122848405 CDS
T07796
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Pathway
agif03013
Nucleocytoplasmic transport
agif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122848405
03015 mRNA surveillance pathway
122848405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122848405
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122848405
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122848405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF3069
AAA_30
Motif
Other DBs
NCBI-GeneID:
122848405
NCBI-ProteinID:
XP_044002406
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All DBs
Position
LG2:4224611..4226637
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AA seq
472 aa
AA seq
DB search
MTSEKVNWAALADEHEKLSSNVEGLSIDQNASSKIDNSSTDEDQAPSAAEQSLLQKILRK
GLIESTKDLKIQRKDPNSPLYSVKTFEALNLKPDLLKGVYKMGFSAPSKIQETALPTLLA
DPPQNLIAQSQSGTGKTAAFVLAMLSRVDTTKPYPQVVCLSPTYELAIQTGEVAAQMARY
CPDIKMKYAVRGEDLPRGTKLDDHIIIGTPGKTLDWSLKYRFFDLSKITVFVLDEADVMI
DTQGHQDQCIRIHKMLSSKCQMMFFSATYDEKVMEFAEMIVTNPLIMRLMREEECLDNIK
QYYVKCNSEEEKYAAIRTIYSLITVGQAIIFCRTKKTASWLSGKMKQDGHGVAMISGELN
VDERIKVLDRFRIGDERVLITTNVLARGIDVSAVTMVVNFDLPTDMNRKADYETYLHRIG
RTGRFGMAGIAINLIDSDEMMTVCQDIEKHFGKKIILLDTENEEEVEKIGDS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaaaaagttaattgggctgctcttgctgatgagcacgaaaaattatcaagc
aatgtagaaggattatcaattgaccaaaatgcatcttccaagattgacaattcatcaaca
gatgaagatcaagcaccatctgctgctgaacaatcattgttacaaaaaattttacgtaaa
ggtcttattgagagtacaaaagatttaaaaattcaacgtaaagatccaaattcaccatta
tacagtgtcaaaacatttgaagcattaaatttgaagcctgatttgttaaaaggtgtttat
aaaatgggtttcagtgctccatcaaaaatccaagaaacagctttaccaactttactagct
gatccaccacaaaatttaattgcacaatctcaatctggtactggtaaaacagcagcattt
gtattggcaatgttgagtcgtgttgatacaacaaaaccatatccacaagttgtatgttta
tcgccaacatatgaattggcaattcaaactggtgaagttgctgcacaaatggcacgttat
tgtccagatattaaaatgaaatatgctgttagaggtgaagatttaccaagaggaacaaaa
ttagatgatcatattataattggtacaccaggaaaaacattagattggtcattgaaatat
agattttttgatttatctaaaataacagtatttgtacttgatgaagctgatgttatgatt
gacacacaaggacatcaagatcaatgtataagaattcataaaatgctatcatcaaaatgt
caaatgatgttcttttcagcaacatatgatgaaaaagttatggaatttgctgaaatgatt
gtgacaaatccattgatcatgagattaatgagagaagaagaatgtcttgataatattaaa
cagtactatgtcaaatgtaattctgaagaagaaaaatatgctgcaattaggactatttat
agtcttattactgttggtcaagcaattattttttgtcgaacaaaaaaaacagcatcttgg
ctgtctggcaaaatgaaacaagatggacatggtgttgctatgatttctggtgaattaaat
gttgatgaaagaatcaaagtacttgatcgttttagaataggtgatgagagagttttaatt
acgacaaatgtcttggcaagaggaattgacgtatcagcagtaacaatggtagttaatttt
gatttaccaactgacatgaatagaaaagctgactatgaaacatatcttcatagaattgga
agaactggaagatttggcatggctggcattgctattaatttaattgactctgatgaaatg
atgactgtatgccaagatattgaaaaacattttggtaaaaaaattattttacttgatact
gaaaatgaagaagaagttgaaaaaattggtgactcataa
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