Aphidius gifuensis: 122848422
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Entry
122848422 CDS
T07796
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
agif
Aphidius gifuensis
Pathway
agif03082
ATP-dependent chromatin remodeling
agif03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122848422
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122848422
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agif01009
]
122848422
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agif03021
]
122848422
03036 Chromosome and associated proteins [BR:
agif03036
]
122848422
Protein phosphatases and associated proteins [BR:
agif01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122848422
Transcription machinery [BR:
agif03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122848422
SWI/SNF complex
122848422
Chromosome and associated proteins [BR:
agif03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122848422
PBAF complex
122848422
SWI/SNF complex
122848422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
122848422
NCBI-ProteinID:
XP_044002428
LinkDB
All DBs
Position
LG2:complement(4142021..4144015)
Genome browser
AA seq
376 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMYRRSITNDERKKLV
ELGLSQHVLASSVSLLRASEVEDIIEGNDDKYKAVSVHSTEPPAPREGKSKKSMPWVPSL
PNSSHLDAVPQATPINRNRVHNKKVRTFPLCYDDTDPSSNIENAAAQEMLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLTFVPAIAQAIRQQIEAFPQETLIED
QCDQRVIIKLNIHVGNTSLVDQVEWDMSEKENNPEKFAMKLCAELGLGGEFVTAIAYSVR
GQLSWHQRTYAFSEAPLPTVEVPFRPPSEADQWAPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGCKKKEKIH
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctctacgtacatacggtgataaaccaataagttttcaagttgaagaaaatggagaa
tattattgtattggttcagaagttggtaattatttacgtttatttcgtggatcattatat
aaacgttatccaggaatgtacagaagatcaataacaaatgatgaaagaaaaaaattagtt
gaattgggtcttagtcagcatgtattagcatcaagtgtatcattattacgtgcaagtgaa
gttgaagatattattgaaggtaatgatgataaatataaagcagtatcagtacattcaact
gaaccaccagcaccaagagaaggtaaatctaaaaaatcaatgccatgggtaccaagttta
ccaaatagttcacatttggatgctgtaccacaagcaacaccaattaatcgtaatcgtgta
cataataaaaaagttagaacatttccactttgttatgatgatactgatccatcatcaaat
attgaaaatgctgctgcacaagaaatgcttgtaccaatacgtcttgacatggaaattgaa
ggacaaaaattacgtgatacatttacatggaataaaaatgaaagtttaataacaccagaa
caatttgctgaggtattgtgtgatgacttggacttgaatccattgacatttgttccggca
attgcacaagcaattcgtcaacaaattgaagcatttccacaagaaacattaattgaagat
caatgtgatcaacgagttattattaaattaaatattcatgttggtaatacatcattggtt
gatcaagttgaatgggatatgtctgaaaaagaaaataatccagaaaaatttgctatgaaa
ttatgtgctgagcttggtcttggtggtgaatttgtaacagcaattgcttacagtgttaga
ggacaattgtcctggcatcaaagaacttatgcattttcagaagcaccattgccaactgtt
gaggtgccatttagaccaccatctgaagctgatcaatgggcaccatttttagaaacactt
actgacgctgaaatggaaaagaaaattcgtgatcaagatcgaaatacaagacgtatgcga
cgacttgccaacactacaccaggctgtaaaaaaaaagaaaaaattcattaa
DBGET
integrated database retrieval system
