Aphidius gifuensis: 122849092
Help
Entry
122849092 CDS
T07796
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
agif
Aphidius gifuensis
Pathway
agif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122849092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122849092
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122849092
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122849092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122849092
NCBI-ProteinID:
XP_044003608
LinkDB
All DBs
Position
LG2:complement(12171160..12176112)
Genome browser
AA seq
827 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVDTFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDELNLQLDKFESEIESLLAGKKKRLDKDKQDRMDELKGKLEKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVEITGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPPLCSTLHNLSSDSSTDTDKKTKPVKPTA
VRPLLNMSQPPIPPVGNTTTVKTNILTSSTPSKTIPMTSSQNSPISNTSATTNHVSTINA
GNFATVAASQNNLQAQHTNTTKVSSNSGENGLSILPTPNVPPSLVQQSQQQLASATLLQQ
QQQQQQQQQQQQQLQIQQQLQLQILQQQQQQQQVQQQQQQVQQQQQQVQQQPQSTPQVQQ
QTASIPQVVQQNVAQTIPQQHQLLPQTAPQPQMQIQQQQQIVTPLPQQLQQQQQLQQQQQ
QQIQIQMNNSITNTTSMPPGIMHNQNHNSSNNDIDIIATTLPRSSSPQSTISSRSSPIPT
NSSSPLPTNSNGIIQKLQTNVDHGPSPLKSIAQQVIVRAGLDIPNVEQNRNIFDNNKINN
STSEAHIPPLLGVAPLGPVPLQKEHQLQFQMMELAYYHMPHPSDSERLRSYLPRNLCPTP
PYYQQVQLPHSDTVEFFQRLSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWF
QRHEEPKIINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagaccggtgccttaaaaaagtaaccgaa
ggtgtagatacatttgaagatatttggcaaaaagttcacaatgcaacaaatagtaatcaa
aaagaaaaatatgaggctgatcttaaaaaagagatcaaaaaattacaaagattacgagat
caaattaaaagttggattgcatctggtgaaatcaaagataaaagtacccttcttgattat
cgaaagctaattgaaacacaaatggaacgattcaaagttgttgaaagagaaactaaaaca
aaagcatattcaaaagaaggtcttggtgcagcacaaaagcttgatccagctcaaaaagaa
cgtgaagaagttagtaattggttagcaaattcaattgacgaattaaatttacaacttgat
aaatttgaatctgaaattgaatcattacttgctggtaagaaaaaacgtcttgataaagat
aaacaagacagaatggatgaattaaaaggtaaattggaaaaacatcgttatcatatacgt
aaattagaaacattactacgtatgttggataatatgtctgttgaagttaatacaattaaa
agaataaaagatgatgttgaatattatattgaatcttcacaagatcctgattttgaagaa
aatgaatatatttatgatgatattattggattagatgaagttgaaataactggtgttggt
ataccatcatcagcaacaactgatagtaataacagtaatgaaactggtggtacaccaaca
tcaactaattcatgtacatcaccaataccatcaccaccactttgttcaacactgcacaat
ttatcaagtgatagttcgactgatacagataaaaaaactaagccagtaaaaccaacagca
gttaggccactattgaacatgtcccagccgcctattccaccagttggtaatacaacaaca
gttaaaacaaatattttaacaagcagtacaccaagtaaaaccattcccatgacatcaagc
caaaattcaccaatatcaaatacgtctgcaacaacaaatcatgtatcaacaattaatgct
ggtaattttgcaacagttgctgcatcgcaaaataatttacaagctcaacacactaatacc
acaaaagtatcatctaatagtggtgaaaatggcttatcaatattgccaacaccaaatgta
ccaccatcacttgtacaacaatcccagcaacaattggcatcggcaacactactgcaacaa
caacaacaacaacaacaacaacagcagcaacagcaacaattacagatacaacaacaacta
cagttacaaatactgcaacaacagcagcagcagcaacaggtacaacaacaacagcaacag
gtacaacaacaacagcaacaggtacaacaacaacctcaatcaaccccacaagtacagcaa
caaactgcttcgatacctcaagttgtacagcaaaatgtggcgcaaacaattcctcaacaa
caccagcttcttccacaaacggcaccacaaccgcaaatgcaaattcaacaacagcaacaa
attgttacccctcttcctcagcaactacaacaacaacagcaactacaacaacaacagcaa
caacaaatacaaatacaaatgaataattcaataacaaatacaacatcaatgccaccaggt
ataatgcataatcaaaatcataattccagcaataatgatattgatataatagcaacaaca
ttaccacgttcatcatcaccacaatcaacaatatcaagtcgttcatcaccaataccaaca
aattcatcatcaccactcccaacaaattcaaatggtattatacaaaaattacaaacaaat
gtggatcatggaccatccccacttaaatcaatagcacaacaagttattgttagagctgga
ttagatataccaaatgttgaacaaaatagaaatatatttgataataataaaattaataat
tcaacatctgaagcacatataccaccattacttggtgttgctccacttggtccagtacca
ttacaaaaagaacatcagttacaatttcaaatgatggaattagcatactaccatatgcca
catccatctgattctgaaagacttagatcatatttaccaagaaatttgtgtccaacacca
ccatactatcaacaggttcaactgcctcactcggatactgtcgaattttttcaacgactg
tcaaccgaaacattatttttcatattttattatatggaaggttcgaaaggacaatatttg
gcagcaaaagcattgaaaaaacaaagttggaggtttcatacaaagtatatgatgtggttc
caacgacatgaagagccaaaaattatcaatgaagaatatgaacagggaacttacatctac
tttgactatgaaaaatggggtcaaagaaaaaaagaaggattcactttcgagtacaagtac
ttagaagatagagatctcaactaa
DBGET
integrated database retrieval system
