Aphidius gifuensis: 122849742
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Entry
122849742 CDS
T07796
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
agif
Aphidius gifuensis
Pathway
agif03018
RNA degradation
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122849742
09123 Folding, sorting and degradation
03018 RNA degradation
122849742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122849742
03041 Spliceosome [BR:
agif03041
]
122849742
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122849742
mRNA degradation factors
5'-3' decay
Lsm complex
122849742
Spliceosome [BR:
agif03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122849742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
122849742
NCBI-ProteinID:
XP_044004475
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All DBs
Position
LG2:complement(24946810..24947511)
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AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSMNQGVEQVVLGLH
IIRGDNVAIVGELDDDIDSRIDLSSIKADPLTSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggacttgaaagttacgtaaatcatactgtatcaataatcacctctgatggt
agaaatttcataggaacattaaagggtttcgatcagacaattaatttgattcttgatgaa
tcacatgaaagagtttacagtatgaatcaaggtgttgaacaagttgttctaggtttacat
attattagaggtgataatgtagcaattgtcggtgaacttgatgatgatatagattcaaga
attgatttatcttcaatcaaagcagatccattaacatcagtagctcattaa
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