KEGG   Aphidius gifuensis: 122849800
Entry
122849800         CDS       T07796                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
agif  Aphidius gifuensis
Pathway
agif03013  Nucleocytoplasmic transport
agif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122849800
  09122 Translation
   03013 Nucleocytoplasmic transport
    122849800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agif03019]
    122849800
   03041 Spliceosome [BR:agif03041]
    122849800
Messenger RNA biogenesis [BR:agif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122849800
Spliceosome [BR:agif03041]
 Complex C
  Other components
   EJC/TREX
    122849800
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122849800
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st RMC1_N Beta-prop_NOL10_N Tricorn_2nd DSE1_N NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C PAC11 TRM82_WD WD40_RFWD3 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Peptidase_S9_N Beta-prop_ELP1_1st PROPPIN Beta-prop_EIPR1 Cytochrom_D1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 122849800
NCBI-ProteinID: XP_044004558
LinkDB
Position
LG1:16017541..16018794
AA seq 323 aa
MTGLNSRVDKLVNYFKSHNKIREQTPHSAKVHSVGWSCDGKYLASGSFDKCVSIFSLSGD
RLKQEALFCGHGGSVDQLCWHASNPDLLSTASGDKTVRIWDTRTQKCTANIGTRGENINI
SWSPNGNTIAVGNKEDLVSFIDVRTMKICAEEQYGFEVNEISWYKDSETFYLTNGQGCVH
ILSYPDLKTLHVIKAHPNTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLEW
PVRTISFSYDGQLLAAASEDLVIDIGEVETGEKIADIPVEAATFTVAWHPKQYLLAYACD
DKDTYDRKRDAGSLKVWGFSNDS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgactggtctcaattcacgcgtcgacaaactagtaaattattttaaatctcacaataaa
atacgagaacaaacaccgcattcagcaaaagtacatagcgttggttggagttgtgatgga
aaatacttggcgtcaggttcattcgacaaatgtgtcagcattttttctttaagtggagat
cgtttgaaacaagaagcattgttttgtggccatggaggtagtgttgaccagctctgttgg
catgcttcaaaccctgatcttctatcaacagctagtggtgacaaaacagtgagaatatgg
gatactagaacacaaaaatgtacagcaaatattggtaccagaggtgaaaatataaatata
tcatggtcaccaaatggtaacacaattgctgttggaaataaagaagatcttgtttcattt
atcgatgtgagaactatgaaaatatgtgctgaagaacagtatggtttcgaagtgaatgaa
atatcctggtataaagattcagagacattctatttaacaaatggacaaggatgtgttcac
atactaagttatcctgatttaaaaacacttcatgtaatcaaagcacatccaaatacctgt
atttgtattgaatttgatccaactggtagatattttgctactggctcagctgatgctctt
gtttctctctgggatgctgatgagttatgttgtttacgaacattttcccgtcttgaatgg
ccagtcagaactatttcattttcatatgatggacaattacttgccgctgcctcggaggat
cttgttattgacattggagaagttgaaaccggtgaaaaaatagctgatataccagttgaa
gcagcaactttcactgttgcctggcatccaaaacaatatctccttgcttatgcttgtgat
gacaaagacacttacgacagaaaacgtgatgctggaagtctcaaagtttggggcttttct
aatgacagctga

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