Aphidius gifuensis: 122852252
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Entry
122852252 CDS
T07796
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
agif
Aphidius gifuensis
Pathway
agif03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122852252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agif03009
]
122852252
Ribosome biogenesis [BR:
agif03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122852252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
122852252
NCBI-ProteinID:
XP_044007883
LinkDB
All DBs
Position
LG3:complement(17143918..17145885)
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AA seq
527 aa
AA seq
DB search
MIRSKGKKRRPKYDPEEEKRLANLVFATGGDIVDTLLKNDSENEKESSESEEEADEEVAS
DDSDAVESNDKEVDDKDSDAIESNDEDSDKVDDEENKNTEDEDKPSIDDDNSDLEEEKNN
KKRKAAWIDEDDQRQTVNDALKIQGRTLPDNQPQKTYGEFVKDKFQKIHGTPKWAKIEDV
DEENEDHKILKQSNHLAVTKSTRLKAGVIDLKVMRDINHETGNEGPVVTSLQFHPTSTVA
FVAGISKKLSVFKVDGRENTVLAKINFERFPIASARFLKEGNEIIVGSRHHDYSQTYDLI
SGSIYQTPLPHKVTNMSRFEVSPNGKLIAIAGKLGEIHLLNGTTRELICQLKMNKTCLAL
AFTQDSNTLLSHGDGNEIYAWDMKQRVCINKSIDDGCLKSKAIAVSPNGQFFATGSSQGI
VNIYDMKSIMETTIPQPLKIVKNLVTPISCVKFNPTSEILAIASKEIKNGFKMVHIPSFK
VFANFPTHNTVMNKPLAIDFSPGSGFLGVTNEKHKAYLYRLNHYKNY
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgattcgttcaaaaggaaaaaaacgaagaccaaaatatgatcctgaagaagaaaaaagg
ttagctaatttagtttttgcaactggaggtgatattgttgatactttattaaaaaatgat
tctgaaaatgaaaaagaatcaagtgaaagcgaagaagaagcagatgaagaagtagcttct
gatgatagtgatgcagttgaaagtaatgacaaagaagttgatgataaagatagtgatgcc
attgaaagtaatgatgaagatagtgacaaggttgatgatgaagaaaataaaaatactgaa
gatgaagataaaccaagtattgatgatgataatagtgatttagaagaagaaaaaaataat
aaaaaaagaaaagcagcatggatagatgaagatgatcaacgtcaaacagttaatgatgct
ttaaaaattcaaggaagaactttacccgataatcaaccacaaaaaacatacggagaattt
gttaaagataaatttcaaaaaattcatggtactccaaaatgggcaaaaattgaagatgtt
gatgaagaaaatgaggatcataaaattttaaaacaaagtaatcatttagctgttacaaaa
tcaacaagactaaaagctggtgtaattgatttaaaagtaatgagagatataaatcatgaa
actggaaatgaaggaccagtagtaacaagtcttcaatttcatccaacttcaacagtagca
tttgttgctggaatatctaaaaaattatctgtatttaaagtggatggaagagaaaatact
gttcttgctaaaattaattttgaaagatttccaatagcatcagcaagatttttaaaagaa
ggcaatgaaattattgttggttcacgacatcatgattatagtcaaacatatgatttaata
agtggatcaatttatcaaactccattgccacataaagtgacaaatatgtcaagatttgaa
gtatcaccaaatggtaaactcatagcaattgctggtaaacttggtgaaatacatctttta
aatggaacaacaagagaattaatttgccaattaaaaatgaataaaacttgtcttgcactt
gcatttacacaagacagtaatactttattatcacatggagatggtaatgaaatttatgca
tgggacatgaaacaaagagtatgtattaataaatcaattgatgatggttgtcttaaaagt
aaagcaattgcagtatcaccaaatggacaattttttgctactggaagtagtcaaggtatt
gttaatatttatgatatgaaatcaatcatggaaacaacaattccacagccattaaaaatt
gttaaaaatcttgtaacaccaataagttgtgttaaatttaatccaacatctgaaatatta
gcaattgcttcaaaggaaatcaaaaatggatttaaaatggttcatataccatcatttaaa
gtgtttgctaattttccaacacataacacagttatgaataaaccattggctattgatttt
tcaccaggaagtggattccttggtgttacaaatgagaaacataaagcttatctgtataga
cttaatcattataaaaattattaa
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