Aphidius gifuensis: 122852599
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Entry
122852599 CDS
T07796
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122852599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122852599
03009 Ribosome biogenesis [BR:
agif03009
]
122852599
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122852599
Spliceosome [BR:
agif03041
]
Complex A
U1 snRNP components
U1 related factors
122852599
Complex B
122852599
Ribosome biogenesis [BR:
agif03009
]
Eukaryotic type
Pre-60S particles
Helicases
122852599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
NCOA6_TRADD-N
Motif
Other DBs
NCBI-GeneID:
122852599
NCBI-ProteinID:
XP_044008432
LinkDB
All DBs
Position
LG3:20083168..20088960
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AA seq
584 aa
AA seq
DB search
MTYGGSSGGYRSGGGGGGGSGSSGGRTGGGGGSSSGQRNSYGNNGGGRFNNSRGGSNSAN
GGSRFGSAGGGGGARGGGNNNNNNNNNSGAGNALRKPNWDHENLRPFKKEFYVPHANVSN
RHPKEVESFRIDKQMTLKGDKIPNPIQHFEEGNFPEYVMQGLRKQGFSEPTAIQAQGWPI
AMSGGNMVGIAQTGSGKTLGYILPAIVHINSQQPLGRGDGPIALVLAPTRELAQQIQTVA
NDFGSLSHVRNTCIFGGAPKGGQARDLERGIEIVIATPGRLIDFLERGTTNLRRCTYLVL
DEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTDYTQLNIGSLQL
SANHNILQIVDVCQEHEKEAKLGTLLQEIGNVNDDGGKTIIFVETKKKVENITRNIRRYG
WPAVCMHGDKSQQERDYVLREFRNKKGSILVATDVAARGLDVDDVKYVINFDYPSSSEDY
IHRIGRTGRSSSTGTSYAFFTPQNSRQAKDLVNVLTEAKQVINPKLAELAQRGGGGSGSG
GYGARNRWGYGGNGGGGSRGRENTFSGQHKRFDNGRSNGYGNSY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacatacggtggttcatctggtggttatcgtagcggtggtggaggaggaggaggttca
ggtagcagtggtggacgtactggaggtggtggtggcagtagtagtggtcaaagaaacagc
tatggaaataatggcggtggtcgttttaacaatagccgtggtggaagtaatagtgcaaac
ggtggatctcgttttggatcagccggaggaggtggtggtgctcgtggtggtggtaataat
aacaataataacaacaataatagtggagctggtaatgcactacgtaaaccaaattgggat
catgaaaatcttcgtccttttaaaaaagaattttatgtaccacatgcaaatgtatcaaat
cgtcatccaaaagaagttgaatcatttcgtattgataaacaaatgacattaaaaggtgat
aaaataccaaatccaattcaacattttgaagagggtaattttccagaatatgttatgcaa
ggacttagaaaacaaggtttttctgaaccaacagcaattcaagcacaaggttggccaata
gcaatgtctggtggtaatatggttggtattgcacaaactggatctggtaaaacacttggt
tatatattaccagcaattgtacatattaatagtcaacaaccacttggtcgtggtgatgga
ccaattgcattagtacttgcaccaacaagagaacttgcacaacaaatacaaacagttgct
aatgattttggttcattatcacatgtacgtaatacatgtatatttggtggtgcaccaaaa
ggtggacaagctagagatttagaacgtggtattgaaattgttattgcaacacctggtaga
cttattgattttcttgaaagaggtacaacaaatttacgtagatgtacatatttagtactt
gatgaagctgatcgtatgttagatatgggttttgagccacaaattagaaaaatcattgaa
caaattagaccagatagacaagtacttatgtggtcagcaacatggccaaaagaagttaga
aatcttgctgaagaatatctcacagattatacacagctaaatattggatcattacaatta
tcagcaaatcataatattttacaaattgttgatgtatgtcaagaacacgaaaaagaagca
aaattgggaacactcctccaagaaattggtaatgtcaatgatgatggtggaaaaacaata
atatttgttgaaacaaaaaaaaaggttgaaaatattacaagaaatatacgtcgttatggc
tggccagcagtttgtatgcatggtgataaatcacaacaagaacgtgactatgttttaaga
gaattcagaaataaaaaaggctcaattttagtggccactgatgtagctgctcgaggactc
gacgttgatgatgtcaaatacgtaatcaattttgattatccatcatcatcagaggattat
atacacagaattggtagaacaggacgttcatcatcaactggtacaagttatgcatttttt
acaccacaaaatagccgacaagctaaagatcttgttaatgtattaactgaagctaaacaa
gttattaatccaaaacttgctgaacttgcacaacgaggtggtggtggaagtggaagtggt
ggatatggtgcaagaaatcgttggggatatggtggtaatggtggtggtggtagtcgtgga
cgtgaaaatacattctccggtcaacataaaagatttgataatggtcgaagcaatggctac
ggtaacagctactaa
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