Aphidius gifuensis: 122852775
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Entry
122852775 CDS
T07796
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122852775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122852775
Spliceosome [BR:
agif03041
]
Complex A
U1 snRNP components
U1 related factors
122852775
Complex B
122852775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
SL4P
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
122852775
NCBI-ProteinID:
XP_044008703
LinkDB
All DBs
Position
LG1:complement(22247355..22250870)
Genome browser
AA seq
840 aa
AA seq
DB search
MESTDGFPQPTVPGYPPVTPTGTSTFGAPIIPTAPFIPPPGLPPGPTGIIQQPFTIPPPG
FGFSINAGQIPEPGVIVAPPQIIGAVHSVNPESASSPSLPINENSSSSTISEKKSEWSEH
KAPDGRIYYYNITTKQSLWEKPDDLKTPTELLLSQCPWKEYKSENGKVYYHNLNTKESRW
TVPLELEQLKNKIIAEGSTSSIIQQINTTNSVNPPPSTILPPPQQITTQSSELNSGKSAI
EQAMAATLAAINIPTPPSKPDDDSNSGKGSANDSRTSTPEPKIQFKDKKEAIEAFKELLK
ERDVPSNATWEQAVKTIQNDPRYPSMKKLNERKQAFNAYKTQKLKEEREQERLRLKKAKE
DLEKFLLNHDRMTSTTKYYKCEEIYGNLEIWRAVADPDRRDIYEDVIFNLAKREKEDAKQ
LKKRNTKRLTQILDTMTEVTYQTTWQEAQALLLQHSSFAEDSDLLEMDKEDALFIFENHI
RQLEKNKEAIKSKNKRRKRLERKNRDGFGSLLDELHVQGKLTSMSLWVELYPMLSADLRF
SAMLGQPGSTPLDLFKYYVEDLKSRFHDEKKAIREILKDKXFEVKRSTTFEKFATIICKD
EKSALLDTGNDQLTNNLLLKXVESNEKERIKEENKKMKKLETGLKQLLKNIDVDYQANWD
DVKLKIENENDYQAIKSESDRIKIFKEYQHDLEESCAHHHIRSKKKKTKKPKRKSRSKSH
SDSETDDKGRKKKHKSRSPSVHSKSESSESESKKLKKKKNKKKSIRSHSHSDSRLPSSEE
SPDRKRKEEKHRRASGHSEASANGEQHAEQPGEQQELSEDELEKQRAQLLHELQMQQEDN
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactgatggatttcctcaaccaacagttcccgggtatccacctgtaactcca
actggaacatcaacttttggagctccaattattccaactgcaccatttataccacctcct
ggattgccaccaggacccacaggtattatccaacagccatttacaattccccctccagga
tttggattttcaatcaatgctggacaaattccagaaccaggagttattgtggcaccacca
caaataattggagcagtacattcagtaaatcctgaatcagcatcaagtccatcattacca
ataaatgaaaattcatcatcatcaacaattagtgaaaaaaaaagtgaatggagtgaacat
aaagcacctgatggacgtatatattattataatataacaacaaaacaatcattatgggaa
aaaccagatgatttaaaaacaccaactgaattattattatcacaatgtccatggaaagaa
tataaatcagaaaatggaaaagtatattatcataatttaaatacaaaagaatcacgttgg
acagtaccattagaacttgaacaacttaaaaataaaataattgctgaaggttcaacatca
tcaataatacaacaaataaatacaacaaattcagtaaatcctccaccatcaacaatttta
cctccaccacaacaaataacaacacaatcgagtgaattaaatagtggaaaatcagcaatt
gaacaagctatggcagcaacattagcagcaataaatattccaacaccaccatcaaaacca
gatgatgatagtaattctggtaaaggtagtgcaaatgatagtcgtacaagtactccagaa
ccaaaaatacaatttaaagataaaaaagaagctattgaagcatttaaagaattattaaaa
gaacgtgatgtaccatcaaatgcaacatgggaacaagctgttaaaacaatacaaaatgat
ccacgttatccatcaatgaaaaaattaaatgaacgtaaacaagcatttaatgcatataaa
acacaaaaattaaaagaagaacgtgaacaagaaagattacgtttaaaaaaagctaaagaa
gatcttgaaaaatttttattaaatcatgatagaatgacaagtacaacaaaatattataaa
tgtgaagaaatttatggtaatttagaaatttggcgtgctgttgctgatccagatcgtcgt
gatatatatgaagatgttatatttaatttagctaaacgtgaaaaagaagatgcaaaacaa
ttaaaaaaacgtaatacaaaaagattaacacaaatattagatacaatgactgaagtaaca
tatcaaacaacatggcaagaagcacaagcattgttacttcaacattcatcatttgctgaa
gattctgatttattagaaatggataaagaagatgcattatttatatttgaaaatcatata
agacaacttgaaaaaaataaagaagcaataaaaagtaaaaataaaagacgaaaaagactt
gaacgtaaaaatcgtgatggttttggtagtttattggatgaattacatgtacaaggtaaa
ttaacatcaatgagtctttgggttgaattgtatccaatgttatcagctgatttacgtttc
tcagcaatgcttggacaacctggttcaacaccacttgatttatttaaatattatgttgaa
gatttaaaatcacgttttcatgatgaaaaaaaagcaatacgtgaaatattaaaagataaa
nnatttgaagtaaaaagaagtacaacatttgaaaaatttgcaacaattatttgtaaagat
gaaaaatcagctttacttgatactggtaatgatcaattaacaaataatttattacttaag
ngtgttgaatcaaacgaaaaagaaagaattaaagaagaaaataaaaaaatgaaaaaatta
gaaacaggcttaaaacaattattaaaaaatattgatgttgattatcaagcaaattgggat
gatgttaaattaaaaattgaaaatgaaaatgattatcaagcaattaaatcagaaagtgat
agaattaaaatatttaaagaatatcaacatgatttagaagaaagttgtgctcatcatcat
attagaagtaaaaaaaaaaaaactaaaaaaccaaaacgtaaatcaagatcaaaatcacac
agtgattctgaaactgatgataaaggaagaaaaaaaaaacataaatcacgtagtccaagt
gttcatagtaaatcagaaagttcagaatcagaaagtaaaaaattaaaaaagaaaaaaaat
aaaaaaaagagtattcgtagtcattcacattctgattcacgtttaccatcatcagaagaa
tcaccagatagaaaaagaaaagaagaaaaacatcgtcgtgcatcaggacacagtgaagca
tcagcaaatggtgaacaacatgctgaacaacctggtgaacaacaggaactatctgaagat
gagttggaaaaacaacgagctcaactacttcatgagttacaaatgcaacaagaagacaat
tga
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