KEGG   Aphidius gifuensis: 122852817
Entry
122852817         CDS       T07796                                 
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
agif  Aphidius gifuensis
Pathway
agif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122852817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agif03019]
    122852817
   03041 Spliceosome [BR:agif03041]
    122852817
Messenger RNA biogenesis [BR:agif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122852817
Spliceosome [BR:agif03041]
 Complex B
  Other components
   Prp19-related factors
    122852817
 Complex C
    122852817
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_15 TPR_8 TPR_2 Mad3_BUB1_I TPR_12 NRDE-2 PPR TPR_10 ATG1-like_MIT2 ARM_TT21_C
Other DBs
NCBI-GeneID: 122852817
NCBI-ProteinID: XP_044008827
LinkDB
Position
LG1:complement(22303747..22306700)
AA seq 856 aa
MPEIQGVPNSTYVFKDDDLPYEEEILRNPYSVKHWSRYIDYLKTSKSPNLNIVFERALKE
LPGSYRLWYQYLCHRRKQLKTRRIDDPLYDDVNNAYERALVFMHKMPRIWMDYCLLMTEQ
SLITRTRHVFDRALRALPITQHHRIWPLYLDFVKSHKIPETAVRVFRRYLKLVPEDTEDY
IKYLRLIRRFDEAALKLAHIVNQDDFVSKHGKSNHQLWNELCDLISKNPMSIKSLNVDAI
IRGGLRRYTDQLGPLWNSLAHYYIRSGLFERARDIFEEAIQTVTTVRDFGQVFDAYAKFE
ELSLKERMKLAKSKPTDDDDIDIELKLARFEDLMERRLLLLNSVLLRQNPHNVQEWHKRV
KLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFAKFYEVNDQLQDARVVFEKATHV
AYLKPEDLASVWCEWAEMEIRHGNCIDALKLMHRATAMPSRKVAYHDDAETVQMRLYKSL
KVWSMYADLEESFGTFQTCKAVYDKIIDLKIATPQIIINYGLFLEENNYFEEAFRAYEKG
VSLFHWPNVYDIWNTYLTQFLNRYGGSKLERTRDLFEQCLEKCPAKYAKALYLLYAKLEE
EHGLSRHAMTVYERATNAVLPEEKFEMFNIYITKAAGIHGVPKTREIYEKAIEVLDDEKT
REMCLRFAEMETKLGEIDRARAIYAHCSQICDPRVTANFWQVWNEFEVRHGNKDTLLEML
RIRRSVEAMYNTHVDMMTAQIINSTTTNQDAPDAMTLVDSRIPPIEPTQTSALKRNISFV
RGVTEGGTTKDGQVINPDEMQINMDDDDDEAEAKDDEELPIEKQTIPLKIFGSLKVTEPE
VNTEENQVISNIHILI
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgccagaaatacaaggtgtacctaatagcacatatgtttttaaagatgatgatttgcca
tatgaagaggagatattgagaaatccatattcagttaaacactggagtcgttatattgat
tatttaaaaacttcaaaaagtccaaatttaaatattgtatttgaacgtgcattaaaagaa
ttaccaggaagttatagattatggtatcaatatttatgtcatcgtcgtaaacaattaaag
acacgtcgtattgatgatcctctttatgatgatgtcaacaatgcatatgaaagagcttta
gtatttatgcataaaatgccaagaatatggatggactattgtttattaatgactgaacaa
tcattgataaccagaacacgtcatgtatttgacagagctctacgtgctcttccaataact
cagcatcatagaatttggccactttatcttgattttgttaaatcacataaaataccagaa
acagcagttagagtatttagaagatatttaaaattagtaccagaagatactgaggattac
attaagtatcttagattaattagaagatttgatgaagcagcattaaaattagctcacatt
gttaatcaagatgattttgtatcaaaacatggtaaatcaaatcatcaactttggaatgaa
ttatgtgatttaatatctaaaaatccaatgagtataaaatcattaaatgttgatgctatt
attagaggtggtttaagacgttatactgatcaacttggaccattgtggaattcattggct
cattattatatacgtagtggtttatttgaacgtgcacgtgatatttttgaagaagctatt
caaacagttacaactgttagagattttggtcaggtatttgatgcatatgcaaaatttgaa
gaattaagtttaaaagaaagaatgaaactagctaaaagtaaaccaactgatgatgatgac
attgacattgaattaaaactagctagatttgaagatcttatggaacgaagattgttgctg
ttaaattcagttttacttagacaaaatcctcataatgttcaagagtggcataaacgtgtt
aagctgtatgaaggtcaaccacatgaaattataaatacatacacagaagctgtacaaaca
gtacaaccacaattagctgttggtaaattacatactctttgggttgaatttgcaaaattt
tatgaagttaatgatcaactacaagatgcaagagttgtatttgaaaaagcaactcatgtt
gcttatttaaaaccagaagatttagcatcagtttggtgtgaatgggcagaaatggaaata
cgtcatggtaattgtattgatgcattaaaattaatgcatcgtgcaacagcaatgccttca
agaaaagttgcttatcatgatgatgctgaaactgttcaaatgcgtctttataaatcactt
aaagtttggtcaatgtatgctgatttagaagaaagttttggtacatttcagacatgtaaa
gctgtttatgataaaattattgatcttaaaattgcaacaccacaaattatcattaattat
ggattatttttggaagaaaataattactttgaggaagcatttagagcatatgaaaagggt
gttagtctatttcattggccaaatgtttatgacatttggaatacatatttgacccaattt
cttaatagatatggtggtagtaaattggaaagaacaagagatttatttgaacagtgtctt
gaaaaatgtccagcaaaatatgcaaaagcattatatcttctttatgcaaaattagaagaa
gaacatggtttatcacgtcatgcaatgactgtttatgaacgtgcaacaaatgctgtgcta
ccagaagaaaaattcgaaatgtttaatatatatattacaaaagctgctggtatacatggt
gtaccaaaaacaagagaaatatatgaaaaagcaattgaagtacttgatgatgaaaaaaca
agagaaatgtgtcttagatttgctgaaatggaaacaaaacttggtgaaattgatagagca
agagcaatttatgctcattgtagtcaaatatgtgatccaagagttactgctaatttctgg
caagtatggaacgaatttgaagtacgtcatggtaataaagatacattactagaaatgtta
agaataagacgtagtgtagaagcaatgtataatacacatgttgacatgatgactgcacaa
ataataaatagtacaacaacaaatcaagatgcaccagatgcaatgacacttgttgatagt
agaataccaccaattgagccaacgcaaacatctgcattaaaaagaaacatcagttttgtc
agaggtgttactgaaggtggcacgacaaaagatggccaagttattaatccagatgaaatg
caaattaacatggatgatgatgatgatgaagctgaagctaaagatgatgaagagcttcca
attgaaaaacaaacaattcctttaaaaatttttggtagtcttaaagtaacagaaccagaa
gtaaatacagaagaaaatcaagttatatccaatatacatatattaatttaa

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