KEGG   Aphidius gifuensis: 122852825
Entry
122852825         CDS       T07796                                 
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
agif  Aphidius gifuensis
Pathway
agif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:agif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122852825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agif03019]
    122852825
   03041 Spliceosome [BR:agif03041]
    122852825
Messenger RNA biogenesis [BR:agif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122852825
Spliceosome [BR:agif03041]
 Complex B
  Other components
   Prp19-related factors
    122852825
 Complex C
    122852825
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_15 TPR_8 TPR_2 Mad3_BUB1_I TPR_12 NRDE-2 ARM_TT21 PPR TPR_10 DHR-2_Lobe_A ARM_TT21_C ATG1-like_MIT2
Other DBs
NCBI-GeneID: 122852825
NCBI-ProteinID: XP_044008839
LinkDB
Position
LG1:complement(22300362..22303364)
AA seq 848 aa
MPEKQCVPSSTYVFKDDDLPYEEEILRNPYSVKHWSRYIDYLKTSKSPNLNIVFERALKE
LPGSYKLWYQYLCHRRKQLKTRRIDDPLYDDVNNAYERALVFMHKMPRIWMDYCLLMTEQ
SLITRTRHVFDRALRALPITQHHRIWPLYLDFVKSHDIPETAVRVFRRYLKLAPEDTEDY
IEYLILIGRLDEAALKLAHIVNQDDFVSKHGKSNHQLWNELCDLISKNPMRIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDFGQVFDAYAQFE
ELSLKKRMELAESKPTDDDDIDIELKLARFEDLMERRLLLLNSVLLRQNPHNVQEWHKRV
KLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFAKFYEVNDQLQDARVVFEKATHV
AYMKPEDLASVWCEWAEMEIRHGNCIDALKLMHRATAMPSRKVAYHDDAETVQMRLYKSL
KVWSMYADLEESFGTFQTCKAVYDKIIDLKIATPQIIINYGLFLEENNYFEEAFRAYEKG
VSLFHWPNVYDIWNTYLTKFLNRYGGSKLERTRDLFEQCLEKCPAKYAKALYLLYAKLEE
EHGLSRHAMTVYERATNAVLPEEKFEMFNIYITKAAGIHGVPKTREIYEKAIEVLDDEKT
REMCLRFAEMETKLGEIDRARAIYAHCSQICDPRVTANFWQVWKEFEVRHGNEDTVREML
RIKRSVGAMYNTHVDMMTAQIINSTTTNQDAPDAMTLLDSRAAPIEPTQTSALKRNISFV
RGVTEGGTTKDGQVINPDELQIDMDDDDDDDDAEAEDDEELPIEKQTIPSKVFGGLKLPE
PQENTEEN
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgccggaaaaacaatgtgtacctagtagcacatatgtttttaaagatgatgatttgcca
tatgaagaggagatattgagaaatccatattcagttaaacactggagtcgttatattgat
tatttaaaaacttcaaaaagtccaaatttaaatattgtattcgaacgtgcattaaaagaa
ttaccaggaagttataaattatggtatcaatatttatgtcatcgtcgtaaacaattaaag
acacgtcgtattgatgatcctctttatgatgatgtcaacaatgcatatgaaagagcttta
gtatttatgcataaaatgccaagaatatggatggattattgtttattaatgactgaacaa
tcattgataaccagaacacgtcatgtatttgacagagctctacgtgctcttccaataact
cagcatcatagaatttggccactttatcttgattttgttaaatcacatgatataccagaa
acagcagttagagtatttagaagatatttaaaattagcaccagaagatactgaggattac
attgagtatcttatattaattggtagacttgatgaagcagcactaaaattagcccacatt
gttaatcaagatgattttgtatcaaaacatggtaaatcaaatcatcaactttggaatgaa
ttatgtgatttaatatctaaaaatccaatgagaataaaatcattaaatgttgatgctatt
attagaggtggtttaagacgttatactgatcaacttggaccattatggaattcattagct
gattattatatacgtagtggtttatttgaacgtgcacgtgatatttatgaagaagctatt
caaacagttacaactgttagagattttggtcaggtttttgatgcttatgcacaatttgaa
gaattaagtttaaaaaaaagaatggaactagctgaaagtaaaccaactgatgatgatgac
attgacattgaattaaaactagctagatttgaagatctcatggaacgaagattgttgctg
ttaaattcagttttacttagacaaaatcctcataatgttcaagagtggcataagcgtgtt
aaattgtatgaaggtcaaccacatgaaattataaatacatatacagaagctgtacaaaca
gtacaaccacaattagctgttggtaaattacatactctttgggttgagtttgcaaaattt
tatgaagttaatgatcaactacaagatgcaagagttgtatttgaaaaagcaactcatgtt
gcttatatgaaaccagaagatttagcatcagtttggtgtgaatgggcagaaatggaaata
cgtcatggtaattgtattgatgcattaaaattaatgcatcgtgcaacagcaatgccttca
agaaaagttgcttatcatgatgatgctgaaactgttcaaatgcgtctttataaatctctt
aaagtttggtcaatgtatgctgatttagaagaaagttttggcacatttcagacatgtaaa
gctgtttatgataaaattattgatcttaaaattgcaacgccacaaattatcattaattat
ggattatttttggaagaaaataattactttgaggaagcatttagagcatatgaaaaaggt
gttagtctatttcattggccaaatgtttatgacatttggaatacatatttgactaaattt
cttaatagatatggtggtagtaaattggaaagaacaagagatttatttgaacagtgtctt
gaaaaatgtccagcaaaatatgcaaaagcattatatcttctttatgcaaaattagaagaa
gaacatggtttatcacgtcatgcaatgactgtttatgaacgtgcaacaaatgctgtgcta
ccagaagaaaaattcgaaatgtttaatatatatattacaaaagctgctggtatacatggt
gtaccaaaaacaagagaaatatatgaaaaagcaattgaagtacttgatgatgaaaaaaca
agagaaatgtgtcttagatttgctgaaatggaaacaaaacttggtgaaattgatagagca
agagcaatttatgctcattgtagtcaaatatgtgatccaagagttactgctaatttctgg
caagtatggaaagaatttgaagtacgtcatggtaatgaagatacagtaagagaaatgtta
agaataaaacgtagtgtaggagcaatgtataatacacatgttgacatgatgactgcacaa
ataataaacagtacaacaacaaatcaagatgcaccagatgcaatgacacttcttgatagt
agagcagcaccaattgagccaacgcaaacatctgcattaaaaagaaacatcagttttgtc
agaggtgttactgaaggtggtacgacaaaagatggccaagttattaatccagatgaattg
caaattgacatggatgatgacgatgatgatgatgacgctgaagctgaagatgatgaagaa
cttccaattgaaaaacaaacaattccatcaaaagtttttggtggtcttaaactaccagaa
ccacaagaaaatacagaagaaaattaa

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