Aphidius gifuensis: 122853161
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Entry
122853161 CDS
T07796
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
agif
Aphidius gifuensis
Pathway
agif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122853161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122853161
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122853161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
122853161
NCBI-ProteinID:
XP_044009388
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Position
LG3:complement(24706823..24709415)
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AA seq
575 aa
AA seq
DB search
MADESEDQWLYGDSGDSKKSESNQDETPCDEDTVVENTPAIENSEESICPEQPVETTEAD
AEKDNSIDKDVDKLAAKESTTSTTTTTATTEQTTVESSVANGTKDQEDSNDSESDSDDDV
HVVIGDIKSTPATGYNSLNIKRTGLLTNAPGGLDNLKKQTGKFSIDDFETIGVINGIQAH
EYNLDQIEDKPWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLVLNAGGGGGI
GSGIGGVGGGGGGGGGGGGIGGIGGIGPNQNITRISQISITNDNSKYSGIMGPKRAGPPP
GRKMAGTIDVIGSSGLASRRNLDKSPPKENVIQVMTADRREYSRKPGFPDMSVPPPTHGL
PSSFDMPPPPGPGYHANEPAPFYLPDPDSYYQSYEPTQDSQWGNDPTWQPTNLAIPLTHN
DDDKNSGPKSIPTMVPPLSIPPLINTRDQRCDSSSRGPIERERNDRDIESSSRERDRDRD
RSERDKDSSIRERERERDRDRDRDRDRERDRDSMPRDEDKERERDRSRSQYRHKDRHRHR
SRSHSRRHKSRSRSLSRRKKKSRRSDRERSKEDSE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaagtgaagatcagtggctgtatggtgattccggtgacagtaaaaaaagt
gaatcaaatcaagatgaaacaccatgcgatgaagacacagttgttgaaaatacaccagca
attgaaaattcggaagaatcaatttgtccagaacaaccggttgaaacaacagaagctgat
gcagaaaaagataattctattgataaagatgtagataaattagcagcaaaagaatcaaca
acttcaacaacaacaacaacagcaacaactgaacaaacaacagttgagtcttcagtggca
aatggtacaaaagatcaagaagattcaaatgacagtgaatctgattcagatgatgatgtt
catgttgttattggtgatattaaatcaactccagcaactggttataatagtttaaatata
aaaagaactggtttattaacaaatgcacctggtggtcttgataatttaaaaaaacaaact
ggaaaatttagtattgatgattttgaaacaattggagttataaatggcatacaagcacat
gaatataatttagatcaaattgaagataaaccatggcgtcaacctggtgctgatataact
gattattttaattatggttttaatgaagaaacatggcgtgcttattgtgaaagacaaaaa
agaatgagaagtgaatctggtgttggtcttgtattaaatgctggtggtggtggtggtatt
ggttctggtattggtggtgttggaggtggaggtggaggaggcggaggaggtggtggtatt
ggtggaattggtggtattggtccaaatcaaaatatcacacgtatatcacaaatatctata
acaaatgataatagtaaatattcaggaattatgggacccaaaagagctggaccaccacct
ggaagaaaaatggctggtacaattgatgttattggttcttctggtcttgcatcaagaaga
aatttagataaatcaccaccaaaagaaaatgttatacaagttatgacagctgatcgtcgt
gaatattcaagaaaacctggttttcctgatatgagtgtaccaccaccaacacatggactt
ccatctagttttgatatgccaccaccacctggtcctggttatcatgcaaatgaaccagca
ccattttatttaccagatcctgattcttattatcaaagctatgaaccaactcaagacagt
caatggggaaatgatccaacttggcagccaacaaatttagcaattccattgactcacaat
gacgatgataaaaattctggaccaaaatcaataccaacaatggtgccaccattatcaata
ccaccattaataaatacacgagatcaacgttgtgattcatcatcacgtggaccaattgaa
cgagaacgtaatgatagagatattgaatcatcaagtagagaacgtgatagagatcgtgac
agatcagaaagagacaaagattctagtattcgtgaacgtgaacgtgaacgtgatcgcgat
cgtgatcgtgatcgtgatcgtgaacgtgatagagattctatgcctagagatgaagataaa
gaacgtgaacgtgatcgttcacgatcacagtatcgccataaagacagacatcgacatcga
tcaagatcacattcacgtcgtcataaatcacgctcacgtagcttaagtcgtcgtaagaag
aagtcaagacgttctgatcgtgaacgttcaaaggaagacagcgaataa
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