Aphidius gifuensis: 122853388
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Entry
122853388 CDS
T07796
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122853388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122853388
03009 Ribosome biogenesis [BR:
agif03009
]
122853388
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122853388
Spliceosome [BR:
agif03041
]
Complex A
U1 snRNP components
U1 related factors
122853388
Complex B
122853388
Ribosome biogenesis [BR:
agif03009
]
Eukaryotic type
Pre-60S particles
Helicases
122853388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122853388
NCBI-ProteinID:
XP_044009761
LinkDB
All DBs
Position
LG3:complement(26876823..26880444)
Genome browser
AA seq
552 aa
AA seq
DB search
MTYGGSSGGGGGYRSGGGRSGGGGQRSGGYGGGSSGGGRSFGGGRGGGSRFGGGGGGRGN
SNGGALEKPNWDNENLRPFKKDFYVPHAKVTNRSPKEVEAYRREKTMTLKGDDIPNPIQH
FEEGNFPDYVMKGLKKQGFSEPTAIQAQGWPIAMSGGNMVGIAQTGSGKTLGYILPAIVH
INSQTPLARGDGPIALVLAPTRELAQQIQTVANDFGSISRVRNTCVFGGAPKGGQARDLE
RGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV
LMWSATWPKEVKNLAEEYLRDYSQLNIGSLQLSANHNILQIVDVCQESEKEEKLGNLLQE
IGNQNEDGGKTIIFVETKKKVENITKNIRRYGYPAVCMHGDKSQQERDYVLREFRNKKGS
ILVATDVAARGLDVDDVKYVINYDYPSSSEDYIHRIGRTGRSSSTGTSYAFFTPQNSRQA
KDLVNVLTEAKQTINPKLAELAQRGGGYGGGYGGGRSRWGYGGGRGSGGRGGSSFSGSHK
RFDNNRSYGNDY
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacatacggtggatcaagtggaggaggtggaggttatcgcagtggtggaggacgtagt
ggtggcggtggccaaagaagtggcggctacggaggtggttcatcaggtggtggacgttcc
tttggtggaggccgtggcggtggttcacgttttggaggtggcggtggaggccgtggtaat
agcaatggtggtgccctagaaaaaccaaattgggacaatgaaaatcttcgtccatttaaa
aaagatttttatgtaccacatgctaaagtaacaaatcgtagtccaaaagaagttgaagca
tatcgtcgtgaaaaaacaatgacattaaaaggtgatgatataccaaatccaattcaacat
tttgaggaaggtaattttcctgattatgttatgaaaggattaaaaaaacaaggtttctca
gaaccaacagcaattcaagcacaaggttggccaattgctatgtctggtggtaatatggtt
ggtattgcacaaactggatctggtaaaacacttggttatattttaccagcaattgttcat
attaatagtcaaacaccacttgcacgtggtgatggaccaattgcacttgttcttgcacca
acaagagaacttgcacaacaaatacaaactgttgctaatgattttggttcaatatcacgt
gtacgtaatacatgtgtatttggtggtgcaccaaaaggtggacaagcaagagatttagaa
cgtggtgttgaaattgttattgcaacacctggacgtcttattgattttcttgaacgtggt
acaacaaatttacgtagatgtacatatttggtacttgatgaagctgatcgtatgttggac
atgggttttgagccacaaattagaaaaatcattgaacaaattagaccagacagacaagtt
ctcatgtggtcagcaacatggccaaaagaagtcaaaaatcttgctgaagaatatctcagg
gattattcacaattgaacattggatcattgcaattatcagccaatcataatattctacaa
attgttgatgtttgtcaagagagtgaaaaggaagaaaagttaggaaatttacttcaagaa
attggtaatcaaaacgaggatggtggtaaaacaattatctttgttgaaaccaagaagaag
gttgaaaatatcaccaaaaatatacgtcgttatggatacccagcagtttgtatgcatggt
gataaatcacaacaagaacgtgattatgttcttagagaattcagaaataaaaaaggctca
atacttgttgccacagatgtagctgctcgaggtcttgatgttgatgatgttaagtatgta
atcaattatgattatccatcatcatctgaagattatatacacagaattggtagaacagga
cgttcatcatcaactggtacaagttatgcatttttcacaccacaaaatagtagacaagct
aaagatcttgttaatgtattgactgaagctaagcaaactattaatccaaaacttgctgag
cttgcacaaagaggtggtggttatggaggtggctacggtggaggaagaagtcgttgggga
tatggtggtggtcgtggaagtggtggacgtggtggtagctccttttctggttcccacaaa
agatttgacaataacagaagttatggcaacgattattaa
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