Aphidius gifuensis: 122853445
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Entry
122853445 CDS
T07796
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122853445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122853445
03009 Ribosome biogenesis [BR:
agif03009
]
122853445
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122853445
Spliceosome [BR:
agif03041
]
Complex A
U1 snRNP components
U1 related factors
122853445
Complex B
122853445
Ribosome biogenesis [BR:
agif03009
]
Eukaryotic type
Pre-60S particles
Helicases
122853445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
122853445
NCBI-ProteinID:
XP_044009861
LinkDB
All DBs
Position
LG3:27269916..27273705
Genome browser
AA seq
672 aa
AA seq
DB search
MYHRERDPGHRVGSSGGHRVGSNNSIHMTNTSNSSNRGGHHYYEKHHEQMSRGSSSSNSR
GSRFSGGYRGKQPSTGGGNSGGGDVNNSSTKKPSWDTRLLEPIKKNFYVEHPSIKKRLPE
EVDKYRELHEITVKGDNVPYPIQHFEEGNFPDYVMKGLKKQGFSEPTAIQAQGWPIALSG
KDLVAIAQTGSGKTLGYVLPAIVHIINQPKSIVNDNNNSSSSSNNKKGPIALILAPTREL
AQQIQEVANCFGESASVRNTCIFGGAPKGPQAQDLERGVDICIATPGRLIDFLDKGMTNL
RRCTYLVLDEADRMLDMGFEPQIRKIIQQIRPDRQILMWSATWPKEVRNLAEDFLSTYTQ
LNIGSLALSANHNILQIVDVCQEFEKDFKLQRLLQEIGTEKENKTIIFVETKRKVDDITK
NIRRDGWQALSIHGDKNQQERDHVLQEFRSGRTTILVATDVAARGLDVEDVKYVINFDYP
SSSEDYIHRIGRTGRRRQKGTAYAFFTTQNMKHAGDLIAVLREAGQKINPKLNEMAELAN
SSNFNGKGTKRFISSGGNSERGAKRFNSGNNDTRGSYNSSRGRGGGSSHGSVNGASYHSS
YQSYPTSNYNDYTKKSSIDQHSSGYSYGQKSYPPNTSSSSSSVGHGYGEVGGAEGGGGNY
YYPNHNQYRGEY
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcgagaacgagatccaggtcacagagttggtagtagtggtggtcatcgagtt
ggtagtaacaacagtattcacatgacaaataccagtaatagtagtaatagaggtggtcat
cattattatgaaaaacatcatgaacaaatgtcaagaggtagtagtagtagtaacagcaga
ggaagtagattttctggtggatatcgtggtaaacaaccatctactggtggtggtaatagt
ggtggtggtgatgtcaacaacagttcaactaaaaaacccagctgggatacaagattattg
gagccaattaaaaaaaatttttacgttgaacatccatcaataaaaaaaagattaccagaa
gaagttgataaatatcgtgaattacatgaaataacagttaaaggtgataatgtaccatat
ccaattcaacattttgaagaaggcaactttccagattatgttatgaaaggattgaaaaaa
caaggtttctctgagccaacagcaattcaagcacaaggttggccaattgcacttagtgga
aaagatttagttgctattgcacaaactggatctggtaaaacacttggatatgtattacca
gcaattgtacatattattaatcaaccaaaatcaatagtcaatgataataataatagtagt
agcagtagtaataataaaaaaggtccaattgcattgatacttgcaccaacacgtgaattg
gcacaacaaatacaagaagttgcaaattgttttggtgaaagtgcttcagtacgtaataca
tgtatatttggtggtgcaccaaaaggaccacaagcacaagatcttgaacgaggtgttgat
atatgtattgcaacacctggacgtcttattgattttcttgataaaggtatgacaaattta
cgtagatgtacatatttagtacttgatgaagctgatcgtatgttggacatgggttttgag
ccacaaatacgtaaaataatacaacaaatacgtccagatcgtcaaattctcatgtggtca
gcaacatggccaaaagaagttagaaatcttgctgaagattttttatcaacttatacacaa
ctaaatattggctcattggcattatcagcaaatcataatatattacaaattgttgatgtt
tgtcaagaatttgaaaaagattttaagctacaacgtttattacaagaaattggtactgaa
aaagaaaataaaacaataatatttgttgaaacaaaacgtaaagttgatgatattactaaa
aatattagaagagatggatggcaagcattgagtatacatggtgataaaaatcaacaagaa
agagatcatgtattacaagaatttagaagtggtagaacaacaattcttgttgctactgat
gttgctgcacgtggtttagatgttgaagatgttaagtatgttattaattttgattatcca
tcatcatcagaggattacatacatagaattggtagaactggacgtagaagacaaaaaggt
actgcatatgcattttttacaactcaaaatatgaaacatgctggtgatcttattgctgtg
ttacgtgaagctggtcaaaaaattaatccaaaactcaatgaaatggctgaacttgctaat
tcatcaaatttcaatggaaaaggaacaaaaagatttatttcatcaggtggtaattctgaa
agaggtgctaaacgttttaatagtggcaataatgacacaagaggtagttataattcatca
agaggacgtggtggtggttcaagtcatggctctgttaatggagcatcatatcacagctca
tatcaatcttatccaacttcaaattacaatgattacactaaaaaatcaagtatcgatcaa
cactcatcaggatattcttatggccaaaaaagttatccaccaaatacatcatcatcgtca
tcatcagttggccatggatatggtgaagttggtggagctgaagggggtggaggaaattat
tattatccaaatcacaatcaatatcgtggagaatattga
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