Aphidius gifuensis: 122854778
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Entry
122854778 CDS
T07796
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
agif
Aphidius gifuensis
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122854778
Spliceosome [BR:
agif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122854778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
TPR_6
HAT_Syf1_CNRKL1_C
HAT
NRDE-2
PPTA
Motif
Other DBs
NCBI-GeneID:
122854778
NCBI-ProteinID:
XP_044011671
LinkDB
All DBs
Position
LG4:5146573..5152486
Genome browser
AA seq
1075 aa
AA seq
DB search
MSSLSGDENEVMDNVPVRRTRSGRAVKAPVTPKKTPVKKTPTKTRTTRRTTIETESLDDT
TISTIVEENIDENSENGMEFDQVIMEKCEEDTTSSVPFDLDDQVDDEIDEPEYTEIDPEI
EEVVPELESPPPPVVTNNQPTCTILSTLKTKEHPTMGACEEQVITLEDDEEDGGNNDVDK
TMLDSNNVDSSANNGDSIVNEAIDCDQEQDTENTQTNTVENEENMSVEVVPETMMEVEEE
EENVEQTENNIEMEDKSPVDLDDNKKSEPDTEAVSEDELPTEVAAKEPDTEAVSDEELPS
AVPADLGETESVSEDELPPDSEKKRKNQAKIKKPSTPSKVDGSTKRKLNADGEYDENSPI
SETNDETPAKKQALSSDVDDGDDKQNTVEPPPSPKKKVLPELEKYWKAVNEDPSDFTGWT
YLLQYVDQENDPEAARDAYNKFLQRYPYCYGYWRKYADYEKKKGNPENVQTVFDQGLKAI
SLSVDLWLHYINHCKVVHDKDDDKLREQYERAIDACGLEFRSDRLWESYIKWELEGKRLS
RVTALYDRLLSTPTFGYMTHFQTFQEFVSTNSPNKILTTDDFLELRGEVKALLKSDEATT
AVAAKSSSPTPPPPSITTGKEDEEEKEEAAEKKIKEKEEQTNDLPPGEEPLTSDDTPPTD
EETRAIREKIISHRRKMHKANVTDVAARWTYEEGIKRPYFHVKPLERCQLKNWKEYLDFE
IEQKDESRIIILFERCLIACALYDEFWLRFVRYLETLDNDNIDKIRDVYTRACKVHHPKK
PNLHLQWATFEEGLVDFDKAAEILENIDTVMPNMLQVAYRRINLERRRGDLERACTLYEN
YITNSKNRTIANNIAVKYARFLCKFKNNIDMAVDVLIKATDKDKDNPRLYLQLIDLGLQR
NPVNTDEVISYMDMFIDRENADVEQRVLFAQRKVEFLEDFSEDIKQVLKAHEQFQKCIKQ
AKERKKAKNEETKVELSPSSRKTSRANEVSTAVPPPPTATASTTNYQYSGTTPANYQSQQ
FQSGQYANQSGYQQGYQQYPPPSDPNYANYQNWQYSQSAPQAYGPYNQWGSYNYY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactaagtggtgatgaaaatgaagttatggataatgtaccagtaagaagaaca
agatcaggacgtgcagttaaagcaccagtaacaccaaaaaaaacaccagttaaaaaaaca
ccaacaaaaacaagaacaacaagacgaacgacaattgaaacagaatctcttgacgatacg
acaatatcaacaatagttgaggaaaatattgatgaaaatagtgaaaatggtatggaattt
gaccaagtaattatggaaaaatgtgaagaagacacaacatcatcagtaccatttgatctt
gatgatcaggttgatgatgaaattgatgaaccagagtacactgaaattgatcctgaaatt
gaggaagttgtacctgaattagaatcaccaccaccaccagttgtcacaaataatcaacca
acttgtacaatattatcaactttaaaaactaaagaacatccgacaatgggtgcttgtgaa
gaacaagtaataactttagaagatgatgaagaagatggtggtaataatgatgtcgacaag
acaatgcttgacagcaataatgttgattcatcagcaaataatggtgattcaattgtaaat
gaggcaattgattgtgaccaagaacaagatactgaaaatactcaaacaaacactgttgaa
aatgaagaaaatatgtcagttgaagttgtgccagaaacaatgatggaagtagaagaagaa
gaagaaaatgtagaacaaactgaaaataatattgaaatggaagataaatcaccggttgat
ttagatgataataaaaaatcagaacctgatactgaagctgtatcagaagatgaacttcca
acagaagttgctgccaaggagccagatacagaagctgtgtcagacgaagaacttccatct
gctgttccagctgatcttggtgaaactgagtctgtatctgaagacgagctacctccagat
agtgaaaaaaaacgtaaaaatcaagctaaaataaaaaaaccatcaacaccatcaaaagtt
gacggtagtactaagagaaagctcaatgctgatggtgagtatgatgaaaattcaccaata
tctgagacaaatgatgaaacaccagctaaaaaacaggctctatcaagtgacgttgatgat
ggtgatgataaacaaaacactgttgaaccaccaccatcaccaaaaaaaaaagtattacct
gaattagaaaaatactggaaagctgttaatgaggatccatctgattttactggctggaca
taccttcttcaatatgtcgatcaagagaatgatccagaggctgcacgtgatgcatacaat
aaattcttacaacgttatccatattgttacggttattggcgtaaatatgctgattatgaa
aagaaaaaaggaaatccggaaaatgtacaaacggtattcgatcaaggtttgaaagcaata
tcattgagtgttgatttgtggctacattacatcaatcattgtaaagttgtacatgataag
gatgatgataaattacgtgaacaatatgagagagcaattgatgcatgtggattggaattc
agatctgatcgtctatgggagagttatattaaatgggaactagaaggtaaacgtttgagt
cgtgttacagcattatatgatcgtcttttgtcaactccaacatttggctacatgactcac
ttccagacctttcaagaatttgtatcaacaaatagtccaaataaaattttaacaactgat
gattttttggaattacgtggtgaagttaaagcattattaaaatcagatgaagcaacaaca
gcagtagcagcaaaatcatcatcaccaacaccaccaccaccatcaataacaacaggaaaa
gaagacgaagaagaaaaagaagaagcagcagaaaaaaaaataaaagaaaaagaagaacaa
acaaatgatttaccacctggtgaagagccattaacaagtgatgatacaccaccaactgat
gaagaaactcgtgctatacgtgaaaaaataataagtcatcgtcgtaaaatgcataaagca
aatgtaactgatgttgcagcaagatggacatatgaagaaggtattaaaagaccatatttt
catgttaaaccattggaacgttgtcagcttaaaaattggaaagaatatcttgattttgaa
attgaacaaaaagatgaatcaagaataattattttatttgaacgttgtttaattgcttgt
gcactttatgatgaattttggttacgttttgtacgttatcttgagacacttgataatgat
aatattgataaaatacgtgatgtatatacacgtgcatgcaaagtacatcatccaaaaaaa
ccaaatttacatttacaatgggcaacatttgaagagggacttgttgattttgataaagct
gctgaaatattagaaaatattgatacagttatgccaaatatgcttcaagttgcatatcga
agaattaatcttgaaagaagacgtggtgatcttgaaagagcatgtactctatatgaaaat
tatataacaaatagcaaaaatagaacaattgctaataatattgctgttaaatatgcacgt
tttctttgtaaatttaaaaataatattgatatggcagttgatgtattgataaaagcaact
gataaagacaaggataatccaagactttatcttcaattaattgatcttggtcttcaaaga
aatccagtaaataccgatgaggttattagctatatggatatgtttattgatcgtgaaaat
gctgatgttgaacaaagagtattatttgctcagagaaaagttgaatttcttgaagatttt
agtgaagatattaaacaagttctcaaggcacatgagcaatttcaaaaatgtattaaacaa
gctaaagaaagaaaaaaagcaaaaaatgaagaaaccaaagtggaattatcaccatcatca
agaaaaactagccgagctaatgaagtatcaacagcagtaccaccaccaccaacagcaaca
gcatcaacgacaaattatcagtacagtggtacaacaccagcgaattatcaatcacaacaa
tttcaaagtggtcagtatgctaatcaaagtggttatcaacaaggatatcaacaatatcca
ccaccttctgatccaaattatgcaaactaccaaaattggcagtacagtcagagtgcacca
caagcatatggaccatacaatcaatggggatcatacaattactactaa
DBGET
integrated database retrieval system
