Aphidius gifuensis: 122855063
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Entry
122855063 CDS
T07796
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
agif
Aphidius gifuensis
Pathway
agif03013
Nucleocytoplasmic transport
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122855063
09122 Translation
03013 Nucleocytoplasmic transport
122855063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122855063
03041 Spliceosome [BR:
agif03041
]
122855063
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122855063
Spliceosome [BR:
agif03041
]
Complex C
Other components
EJC/TREX
122855063
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122855063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
122855063
NCBI-ProteinID:
XP_044012120
LinkDB
All DBs
Position
LG4:complement(12082738..12088608)
Genome browser
AA seq
1416 aa
AA seq
DB search
MTGNKVWNTDLWKALDKHGKNDFLKLINQKFKEGNTTVWKRGLYELITHGIQGNVKKDNV
VSILAELAIINSAMPSAIVDLFTLIDAEGHTNDIRNNFNYIVKECEKFLTDRILMERLEI
DTLQDVGTLKDRNFHTKFIRVKTKLYYKQRKFNLFREESEGYSKLIVELNQERSTDEVFS
TLEVIKSLIGYFNLDPNRVLDILLETFENKPQNDDLFIPLIRSYMSNPQVLCEVLGFKYR
AAVNATPISLQTVTAMMLQHRLIELDDILPWLVPDDKIIIKDHELQMRQAKDYVKKMSII
STRDKEEILEEPDNIQDKYSTNQKFGLCEALLKVGAWEIVQRLFKRLPDFCLTDKKPIAL
AFCNMIQSMIDIVYRKHCTISPKLPGRTIEPVYKNSLAVKPMQSFIDIHNQLVPMLIILG
PNLHNDPILMYKVMRLCQAVIKSIDRSNCLWNDILTILDVALLPSLSFMDCNCCVAEEMW
NILKCYPYENRYCLYARWKNDTPMQHPALLRKRADAQKKIKSIMKRVSKETIKPVGRTIG
KLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVETLAGADRDRLK
HDGNSISLWLQSLASFCGAIYKKYNIELTGLLQYVANQLKAQKSLDLLILKEIVQKMAGI
EAAEEMTSEQLDAMAGGDLLKNEAGYFTQVRNTKKPSQRLKDALSENDLAVALCLLMAQQ
KHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLASTMTVDEYVQRLPSIHSMLRDNHI
HSDVAFFLARQMFAHAINIKYDSLRKADSNYKKMSITMKQAKWVEAAQSVMAPVAESVRP
LHPLKVWEDISPQFLVTFWSLSIYDLFVPADSYQREINKLKQLVDQTVDSKDMNVSKGKK
EQERCTTLIEKLQDEKRKQEEHVEKVFAYLKQEKDSWFLSRSAKSAKNETITQFLQLCLF
PRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANRYGRFL
CAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCHKWHYKI
TKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLLKLSQILERKVEKVREQERGNRQDLHV
LATSYSGQLKARSSQMIHETDFHHVGETTIKAQDTCSTESNDKITNGVSIKETSNGSEAR
TDKDGKEQREKRPAFNQIQHDSIEKNKKKEATKEDLEAQEKYSKKEEIRDDEIVDKKDRK
YLKEEHYYSGIDNLDRDLSSVSNSSVSSGPPPDTLEREPKRRKLETTLKETKRLEAGSEK
KDRSGKAKSRDEQKELRREKKLGRKRDRAEDAVIAAEQKRRKDDDKTKSTHQNGDIPEHR
EKHHYSKEKSPYNKEQRIHEREGRDKHRRSSDPKRR
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtaataaagtgtggaatactgatctatggaaggcattggataaacacggaaaa
aatgatttcctcaaacttatcaaccagaaattcaaggaaggaaacacgacagtatggaag
cgaggattgtacgaattaattacccatgggattcaaggaaacgtaaaaaaggacaatgtt
gtatctattctggctgagttggcgatcattaacagcgcaatgccctcagccatagttgac
ctgttcactttgattgatgctgaaggtcatactaatgatataagaaataacttcaattat
attgtaaaagaatgcgaaaagtttttaacagacaggatcctcatggaaagactggaaatt
gataccctacaagatgttggcaccctaaaagatcgaaactttcatacaaaattcatccga
gtcaagacaaaactttactataaacagcgtaaatttaatctatttagagaagaaagtgaa
ggatattctaagctaatagttgagctaaatcaagagagatcaactgatgaagttttcagt
actttggaagttattaaaagtttgattggatacttcaatctagatccaaatcgagtactt
gatattcttctcgaaactttcgaaaacaagcctcaaaatgatgatttgtttattcctctt
atacgctcttacatgagcaatccacaagtactatgcgaggtacttggttttaaatatcgt
gcagcagtcaatgcaacaccaatttcgttgcaaacagtaacagcaatgatgcttcaacat
cgtctaattgaactggatgatattttgccgtggttggttccagatgacaaaataattata
aaagatcatgagctacaaatgcgtcaggcaaaagattacgtcaaaaaaatgagtattatt
tctaccagggataaagaagaaatactagaagagcctgataacatccaagacaagtattcg
acaaaccaaaaatttggtctttgcgaggctctcttaaaagttggtgcttgggaaattgtt
caaagattatttaaacgacttcctgatttttgtttgactgacaaaaagccaattgctctt
gctttttgcaacatgatacagtcaatgatcgatatagtttatcggaagcactgcactata
tcacccaagctaccaggtcgtacaattgagcccgtttacaagaactcattggcagttaag
ccgatgcaatcatttattgatattcataaccagctcgtaccaatgctcatcattcttggt
ccaaatctacataacgatcctatcctcatgtacaaagtaatgagactatgtcaagctgta
atcaagtctatcgatagaagcaactgtctctggaacgatattctcacgattcttgatgtt
gctttgcttccatcattgtcatttatggactgtaactgctgcgttgctgaagaaatgtgg
aacattctcaagtgttatccatatgagaaccgatattgcttgtatgccagatggaaaaat
gatacgccgatgcagcatccagcacttttacgtaagcgtgcagatgcccaaaagaaaata
aagtcaattatgaaaagagtcagcaaagaaacaataaaaccggttgggcgtactattggt
aagttgacacattcgtcacctggtgttctgtttgattatgtactgatacaaattcagctc
tacgacaatctcattggtcctgttgttgattccttgaaatatcttactaatatttcttac
gatgttcttggctattgtcttgttgagacgcttgcgggtgctgatcgtgacagattaaag
catgacggtaacagcatctctctttggcttcagtctcttgcatctttttgtggtgctata
tacaaaaagtataacattgagctaactggtttattgcagtacgtcgctaatcagttgaaa
gcacaaaaaagcctagacttactgattcttaaagaaattgtacaaaaaatggcgggaatt
gaggctgctgaagaaatgacctccgagcaattggatgcgatggctggtggagatttgctg
aaaaacgaagctggatattttactcaagttcgaaatacaaaaaaaccatcacagcgctta
aaagatgcactttcagaaaatgatttagctgtagcactttgtcttttgatggcacaacaa
aaacactgcgttgtttatcgagaaactgataaatcacatttaaaacttgttggaaagtta
tacgatcaatgtcaagatactctggtgcaatttggtacatttcttgcgtcaacaatgact
gtagacgaatatgttcagcgcttaccttcaatacacagtatgttgcgagataatcacatt
cactcagatgtagctttttttttagcacgacagatgttcgctcatgcaatcaacataaag
tatgattcccttcgtaaagctgattcaaattacaaaaaaatgtctattaccatgaagcaa
gccaaatgggttgaagcagcgcaatcagttatggcacccgttgctgagtcagttcggcca
cttcatccacttaaagtttgggaggacatttcacctcaatttctcgtgacattttggtct
ctttcaatttatgatttatttgttcctgctgatagttatcaacgtgaaatcaacaaactt
aagcagctcgttgatcaaactgttgattccaaagacatgaatgtcagcaaaggtaagaaa
gagcaagaacgttgcacaacgcttattgaaaaacttcaagatgaaaaaagaaaacaagaa
gaacatgttgaaaaagtatttgcttatttgaagcaagaaaaagattcttggtttttatcg
agaagtgccaagtctgcaaaaaatgaaaccatcacacagtttcttcaattatgtttattt
cctagatgcacatttacaactgttgatgcaatgtattgtgctaagtttgttcacacaatt
cattccttgaaaacagccaatttttcaacattactttgctatgatcgactattctgtgat
atcacttattcagtaacatcttgtactgaaaatgaagcaaatcgatatggtcgtttttta
tgtgccatgcttgaaacagtcatgagatggcattcagagaaagccatatttgacaaagaa
tgcagtaattatccaggatttgttacaaagttccgtgtgagtaatcaattctcagaagct
aatgacatggtaggatttgaaaattaccgtcatgtttgtcataaatggcactataaaatt
acaaaagctattgtcgtatgcttggactcaaaagactatgttcaaataagaaactctcta
attattttgattaagatacttccccattttccagtgcttttgaaattatcgcaaatactt
gagcgtaaagttgaaaaagtacgtgaacaagaacgtggaaatagacaagatcttcatgta
ctcgcaacgtcttacagtggccagttgaaagcaagatcatcacaaatgattcatgaaaca
gattttcatcacgtcggtgaaacaaccataaaagcccaagacacatgcagcactgagtct
aatgataaaattactaatggtgtttccatcaaagagaccagtaatggttctgaagcacgc
actgataaagatggcaaagaacaacgcgagaaacgaccagcttttaatcaaattcaacat
gattcaattgaaaaaaataaaaaaaaagaagcaaccaaagaagatctggaagctcaagaa
aaatattcgaaaaaagaagaaataagagatgatgaaatagtagacaaaaaagaccgcaaa
tatttaaaagaagaacattactacagcggaattgataatttagatcgagatttgtctagt
gtttctaatagcagcgtgagctccggtccacctccagatactcttgagagagaacctaag
agaagaaagctagaaaccactttgaaagaaactaaacgtctagaagctggtagtgagaaa
aaagaccgttctggaaaagctaaatcgcgagatgagcagaaagaattgcgtcgagaaaaa
aaactcggtcgtaaaagagatcgtgctgaagatgctgttattgccgctgagcaaaaacga
agaaaagacgatgataaaactaaaagtactcatcaaaatggagatataccagaacaccgt
gaaaaacatcactacagtaaggaaaaatcaccatacaataaagaacagcgcattcatgag
cgtgaagggcgtgataaacatagacggagttcagatccaaaacgaagatga
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integrated database retrieval system
